Top 10 genes with highest correlation to Rv2254c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3480c/- | (cc=0.5516) | info on Rv3480c/- |
| Rv3655c/- | (cc=0.5428) | info on Rv3655c/- |
| Rv0470A/- | (cc=0.5303) | info on Rv0470A/- |
| Rv0965c/- | (cc=0.5201) | info on Rv0965c/- |
| Rv1052/- | (cc=0.5109) | info on Rv1052/- |
| Rv0406c/- | (cc=0.5094) | info on Rv0406c/- |
| Rv3062/ligB | (cc=0.5076) | info on Rv3062/ligB |
| Rv2564/glnQ | (cc=0.5001) | info on Rv2564/glnQ |
| Rv2917/- | (cc=0.4995) | info on Rv2917/- |
| Rv2282c/- | (cc=0.4828) | info on Rv2282c/- |
Correlation of Rv2254c/- with Rv0470A/-
Normalized LFCs for Rv2254c/-:
(description and provenance of datasets)
| Rv2254c/- | Rv0470A/- | |
| Fe_supp_jason_reseq | -0.325 | -0.748 |
| low_pH_jason_reseq | 1.151 | -0.236 |
| NO_jason_reseq | 0.795 | -0.139 |
| B6_jason_reseq | 0.97 | 0.027 |
| MHCII_jason_reseq | 1.039 | 0.075 |
| Isoniazid02 | 0.656 | 1.019 |
| Rifampicin4 | 0.252 | 0.571 |
| Ethambutol3 | 2.652 | 0.776 |
| Meropenem3 | 0.984 | 1.85 |
| Vancomycin16 | 0.698 | 0.716 |
| Rv2680_day32 | 0.0 | -0.505 |
| H37Rv_KO_MarP | -0.778 | 0.686 |
| hypoxia_3wks | -1.025 | -0.415 |
| hypoxia_6wks | 0.282 | -1.401 |
| glycerol | 0.064 | -0.009 |
| cholesterol | 0.305 | -0.15 |
| AJ | -0.709 | -0.812 |
| Bibs02 | -0.445 | -0.099 |
| Bibs02c | 0.48 | 0.362 |
| BL6 | -2.156 | -1.052 |
| BL6a | 0.139 | -0.492 |
| BXD01 | -0.531 | -1.861 |
| BXD010 | -0.79 | -1.26 |
| BXD011 | -0.403 | -1.343 |
| BXD03 | -0.855 | -1.932 |
| BXD04 | -1.235 | -1.959 |
| BXD05 | -0.996 | -1.381 |
| BXD06 | -0.311 | -1.533 |
| BXD07 | -1.858 | -1.565 |
| BXD08 | -1.196 | -1.577 |
| BXD09 | -0.415 | -2.007 |
| CAST | 0.195 | 0.065 |
| CCcont | -1.691 | -0.641 |
| DS01 | 0.303 | 0.71 |
| DS02 | 1.336 | 0.714 |
| DS04 | 0.704 | 0.96 |
| DS0c | 0.859 | 0.658 |
| GP01 | -1.166 | -1.03 |
| GP02 | -1.821 | -0.776 |
| GP0c | -1.708 | -1.118 |
| NOD | -1.292 | 0.073 |
| NZO | -1.718 | -0.341 |
| PWK | -0.418 | -0.428 |
| H37Rv_KO_CtpC | 0.039 | -0.818 |
| H37Rv_KO_CtpD | -2.293 | 0.323 |
| H37Rv_KO_Rv1272 | 0.512 | -0.706 |
| H37Rv_KO_SugABC | 1.302 | -0.798 |
| H37Rv_KO_MbtN | -1.654 | -1.506 |
| Trans05 | 0.814 | -0.854 |
| macrophage_unactivated | -0.502 | -0.66 |
| IL1 | -1.264 | -0.46 |
| Rapamycin | -1.307 | -0.411 |
| Tcell | -0.225 | -0.593 |
| GMCSF | 0.42 | -0.232 |
| IFNab | -0.538 | -0.565 |
| IFNg | -0.377 | -0.802 |
| IFNg_GMCSF1 | 0.053 | -0.277 |
| Rv1432_day32 | -3.142 | -1.448 |
| Rv1565c_day32 | 0.0 | -0.329 |
| secA2_input | -0.585 | 0.534 |
| delta_Rv3594 | -1.38 | -1.834 |
| delta_Rv3717 | -1.183 | -1.651 |
| delta_Rv3811 | -0.03 | -1.517 |
| delta_Rv0954 | 0.199 | -0.099 |
| PonA1 | 1.2 | -0.293 |
| EccD1_KO | 1.059 | -0.753 |
| EspI_KO | -1.015 | -0.742 |
| PE35_KO | 0.831 | -0.633 |
| PPE68_KO | 0.48 | -0.909 |
| glycerol2 | -0.168 | 0.611 |
| lignocerate | 0.069 | 0.497 |
| oleate | -0.597 | 0.214 |
| phosphatidylcholine | 0.08 | 0.336 |
| acetate | -0.131 | -0.04 |
| glucAc | -0.762 | -0.321 |
| Rv0950ko | 1.113 | 1.113 |
| Rv1096ko | 1.384 | 0.893 |
| Rv3684ko | 2.044 | 0.678 |
| delta_otsA_trehalose | -0.315 | 0.027 |