Top 10 genes with highest correlation to Rv2240c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237A/- | (cc=0.6602) | info on Rv2237A/- |
| Rv2613c/- | (cc=0.6501) | info on Rv2613c/- |
| Rv1038c/esxJ | (cc=0.631) | info on Rv1038c/esxJ |
| Rv1852/ureG | (cc=0.6089) | info on Rv1852/ureG |
| Rv2851c/- | (cc=0.5973) | info on Rv2851c/- |
| Rv3559c/- | (cc=0.5927) | info on Rv3559c/- |
| Rv2802c/- | (cc=0.5898) | info on Rv2802c/- |
| Rv3535c/hsaG | (cc=0.5894) | info on Rv3535c/hsaG |
| Rv3874/esxB | (cc=0.5734) | info on Rv3874/esxB |
| Rv0442c/PPE10 | (cc=0.5727) | info on Rv0442c/PPE10 |
Correlation of Rv2240c/- with Rv2237A/-
Normalized LFCs for Rv2240c/-:
(description and provenance of datasets)
| Rv2240c/- | Rv2237A/- | |
| Fe_supp_jason_reseq | 0.867 | 1.1 |
| low_pH_jason_reseq | -0.343 | -0.631 |
| NO_jason_reseq | -0.452 | -0.32 |
| B6_jason_reseq | -1.099 | -0.363 |
| MHCII_jason_reseq | -0.179 | -0.119 |
| Isoniazid02 | 0.039 | 0.362 |
| Rifampicin4 | 0.704 | 0.42 |
| Ethambutol3 | 0.883 | 0.275 |
| Meropenem3 | 1.139 | 1.324 |
| Vancomycin16 | 0.955 | -0.146 |
| Rv2680_day32 | -0.647 | -0.978 |
| H37Rv_KO_MarP | 0.401 | -0.181 |
| hypoxia_3wks | -0.797 | -0.606 |
| hypoxia_6wks | -0.616 | -2.552 |
| glycerol | -0.462 | -0.162 |
| cholesterol | -0.669 | -0.957 |
| AJ | -1.476 | -0.171 |
| Bibs02 | -1.416 | -0.011 |
| Bibs02c | -0.881 | -0.634 |
| BL6 | 0.072 | -1.255 |
| BL6a | -0.74 | -1.158 |
| BXD01 | -1.069 | -2.152 |
| BXD010 | -0.365 | -1.848 |
| BXD011 | -0.418 | -1.339 |
| BXD03 | -0.744 | -1.858 |
| BXD04 | -1.015 | -1.646 |
| BXD05 | -0.442 | -2.148 |
| BXD06 | -0.352 | -1.59 |
| BXD07 | -0.606 | -2.937 |
| BXD08 | -0.9 | -1.02 |
| BXD09 | -0.095 | -1.931 |
| CAST | -1.185 | -1.253 |
| CCcont | 0.372 | -1.09 |
| DS01 | -0.938 | 0.599 |
| DS02 | -0.06 | 0.348 |
| DS04 | -1.639 | 0.046 |
| DS0c | 0.503 | 0.55 |
| GP01 | -0.339 | -2.855 |
| GP02 | 0.732 | -2.261 |
| GP0c | 0.301 | -2.818 |
| NOD | -1.791 | -0.965 |
| NZO | -1.568 | 1.238 |
| PWK | -0.308 | -1.147 |
| H37Rv_KO_CtpC | -0.807 | 0.029 |
| H37Rv_KO_CtpD | 1.292 | 1.152 |
| H37Rv_KO_Rv1272 | -0.911 | -0.671 |
| H37Rv_KO_SugABC | 1.024 | -2.615 |
| H37Rv_KO_MbtN | -1.696 | -1.135 |
| Trans05 | -0.15 | -3.449 |
| macrophage_unactivated | -0.028 | -1.657 |
| IL1 | 1.332 | 0.347 |
| Rapamycin | 1.814 | 1.565 |
| Tcell | -0.495 | -0.081 |
| GMCSF | 2.009 | 0.758 |
| IFNab | 1.146 | -0.635 |
| IFNg | 0.796 | -0.877 |
| IFNg_GMCSF1 | 0.691 | -0.157 |
| Rv1432_day32 | -0.141 | 1.645 |
| Rv1565c_day32 | 0.595 | -0.218 |
| secA2_input | -0.668 | -0.194 |
| delta_Rv3594 | -0.268 | 0.376 |
| delta_Rv3717 | -0.639 | -1.828 |
| delta_Rv3811 | -0.473 | -0.528 |
| delta_Rv0954 | -0.846 | 0.318 |
| PonA1 | -0.507 | -1.895 |
| EccD1_KO | 0.431 | 0.148 |
| EspI_KO | 0.975 | 0.864 |
| PE35_KO | 0.7 | 0.957 |
| PPE68_KO | 0.614 | 1.241 |
| glycerol2 | 2.79 | 3.085 |
| lignocerate | 3.113 | 4.586 |
| oleate | -1.733 | 0.196 |
| phosphatidylcholine | 2.518 | 3.931 |
| acetate | 3.621 | 5.94 |
| glucAc | 3.241 | 4.505 |
| Rv0950ko | -0.38 | 0.1 |
| Rv1096ko | -0.021 | -0.504 |
| Rv3684ko | 0.249 | -1.88 |
| delta_otsA_trehalose | 2.537 | 4.101 |