Top 10 genes with highest correlation to Rv2231c/cobC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0866/moaE2 | (cc=0.5341) | info on Rv0866/moaE2 |
| Rv2806/- | (cc=0.5281) | info on Rv2806/- |
| Rv2160c/- | (cc=0.5268) | info on Rv2160c/- |
| Rv3854c/ethA | (cc=0.5082) | info on Rv3854c/ethA |
| Rv3650/PE33 | (cc=0.5053) | info on Rv3650/PE33 |
| Rv2993c/- | (cc=0.5016) | info on Rv2993c/- |
| Rv2947c/pks15 | (cc=0.4998) | info on Rv2947c/pks15 |
| Rv3361c/- | (cc=0.4984) | info on Rv3361c/- |
| Rv3150/nuoF | (cc=0.4963) | info on Rv3150/nuoF |
| Rv1420/uvrC | (cc=0.4947) | info on Rv1420/uvrC |
Correlation of Rv2231c/cobC with Rv2806/-
Normalized LFCs for Rv2231c/cobC:
(description and provenance of datasets)
| Rv2231c/cobC | Rv2806/- | |
| Fe_supp_jason_reseq | -0.463 | -0.54 |
| low_pH_jason_reseq | -0.1 | -1.087 |
| NO_jason_reseq | -0.079 | -0.992 |
| B6_jason_reseq | -1.435 | -0.321 |
| MHCII_jason_reseq | -0.893 | 0.315 |
| Isoniazid02 | -0.581 | -0.589 |
| Rifampicin4 | 0.133 | -0.495 |
| Ethambutol3 | -0.158 | -0.754 |
| Meropenem3 | -0.363 | -0.621 |
| Vancomycin16 | -0.568 | -0.045 |
| Rv2680_day32 | 0.811 | -0.554 |
| H37Rv_KO_MarP | -1.507 | 0.023 |
| hypoxia_3wks | 0.467 | 1.196 |
| hypoxia_6wks | 1.205 | 1.063 |
| glycerol | 0.162 | 0.513 |
| cholesterol | -0.264 | -1.016 |
| AJ | -0.424 | 1.407 |
| Bibs02 | 0.946 | 0.343 |
| Bibs02c | -0.182 | -0.808 |
| BL6 | 0.477 | -0.483 |
| BL6a | 1.122 | -0.036 |
| BXD01 | 1.214 | 1.022 |
| BXD010 | 0.629 | 0.486 |
| BXD011 | 1.498 | 0.584 |
| BXD03 | 1.088 | 0.325 |
| BXD04 | 2.739 | 0.308 |
| BXD05 | 1.863 | 0.544 |
| BXD06 | 1.947 | 0.394 |
| BXD07 | 1.383 | 1.055 |
| BXD08 | 2.292 | 0.866 |
| BXD09 | 1.614 | 0.482 |
| CAST | -0.791 | 0.093 |
| CCcont | 1.202 | -0.766 |
| DS01 | 0.0 | 0.135 |
| DS02 | -0.189 | 0.947 |
| DS04 | -0.453 | 0.354 |
| DS0c | 1.383 | 0.418 |
| GP01 | 0.0 | 0.576 |
| GP02 | -0.286 | 0.207 |
| GP0c | -0.113 | -0.269 |
| NOD | -0.905 | -0.449 |
| NZO | 1.225 | 1.428 |
| PWK | -0.171 | 1.144 |
| H37Rv_KO_CtpC | 0.571 | 0.84 |
| H37Rv_KO_CtpD | -0.591 | -1.44 |
| H37Rv_KO_Rv1272 | 1.338 | 1.179 |
| H37Rv_KO_SugABC | 0.586 | 0.568 |
| H37Rv_KO_MbtN | 1.226 | 1.216 |
| Trans05 | 1.536 | 1.05 |
| macrophage_unactivated | 1.922 | 0.237 |
| IL1 | 1.139 | -0.208 |
| Rapamycin | 1.669 | 0.307 |
| Tcell | 1.189 | 0.701 |
| GMCSF | 1.014 | -0.586 |
| IFNab | 0.683 | -0.435 |
| IFNg | 0.82 | -0.094 |
| IFNg_GMCSF1 | 1.546 | -0.163 |
| Rv1432_day32 | -0.618 | 0.733 |
| Rv1565c_day32 | -1.989 | -0.539 |
| secA2_input | -0.62 | -0.218 |
| delta_Rv3594 | 2.709 | 2.226 |
| delta_Rv3717 | 2.718 | 1.441 |
| delta_Rv3811 | 2.314 | 2.28 |
| delta_Rv0954 | 1.773 | 1.567 |
| PonA1 | 1.506 | 0.925 |
| EccD1_KO | 0.201 | 0.0 |
| EspI_KO | -0.787 | -0.026 |
| PE35_KO | 0.265 | 0.42 |
| PPE68_KO | 0.099 | 0.637 |
| glycerol2 | 0.0 | 0.205 |
| lignocerate | 0.082 | -0.393 |
| oleate | 0.539 | 1.009 |
| phosphatidylcholine | 0.213 | 0.356 |
| acetate | -0.283 | -0.735 |
| glucAc | -0.405 | -1.598 |
| Rv0950ko | 0.395 | 0.516 |
| Rv1096ko | 0.202 | -0.187 |
| Rv3684ko | 0.0 | 0.265 |
| delta_otsA_trehalose | 0.58 | -0.492 |