Top 10 genes with highest correlation to Rv2208/cobS:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0995/rimJ | (cc=0.5895) | info on Rv0995/rimJ |
| Rv3323c/moaX | (cc=0.5874) | info on Rv3323c/moaX |
| Rv0488/- | (cc=0.5559) | info on Rv0488/- |
| Rv0593/lprL | (cc=0.5304) | info on Rv0593/lprL |
| Rv3287c/rsbW | (cc=0.5296) | info on Rv3287c/rsbW |
| Rv3353c/- | (cc=0.5283) | info on Rv3353c/- |
| Rv0312/- | (cc=0.52) | info on Rv0312/- |
| Rv0387c/- | (cc=0.519) | info on Rv0387c/- |
| Rv2237/- | (cc=0.5161) | info on Rv2237/- |
| Rv1198/esxL | (cc=0.5146) | info on Rv1198/esxL |
Correlation of Rv2208/cobS with Rv0312/-
Normalized LFCs for Rv2208/cobS:
(description and provenance of datasets)
| Rv2208/cobS | Rv0312/- | |
| Fe_supp_jason_reseq | 0.991 | 0.638 |
| low_pH_jason_reseq | -0.136 | 0.331 |
| NO_jason_reseq | -1.113 | -0.113 |
| B6_jason_reseq | -0.591 | 0.135 |
| MHCII_jason_reseq | -0.163 | 0.678 |
| Isoniazid02 | -1.937 | 0.533 |
| Rifampicin4 | -1.359 | -2.296 |
| Ethambutol3 | -2.013 | 0.942 |
| Meropenem3 | -2.443 | -0.386 |
| Vancomycin16 | -1.846 | -2.406 |
| Rv2680_day32 | -0.208 | -1.374 |
| H37Rv_KO_MarP | 0.104 | 0.181 |
| hypoxia_3wks | -0.666 | -1.467 |
| hypoxia_6wks | -1.631 | -0.867 |
| glycerol | 1.29 | 0.619 |
| cholesterol | 0.356 | 0.223 |
| AJ | 1.05 | -0.771 |
| Bibs02 | 0.813 | 0.686 |
| Bibs02c | 0.788 | 0.235 |
| BL6 | 0.32 | 0.49 |
| BL6a | -0.05 | 0.264 |
| BXD01 | -0.745 | -0.476 |
| BXD010 | -0.118 | 0.897 |
| BXD011 | -1.076 | 0.297 |
| BXD03 | -1.031 | 0.263 |
| BXD04 | -0.486 | -0.156 |
| BXD05 | -1.745 | -0.135 |
| BXD06 | -0.363 | -0.168 |
| BXD07 | -0.544 | -0.46 |
| BXD08 | -0.677 | -0.358 |
| BXD09 | -0.716 | -0.216 |
| CAST | -0.781 | 0.402 |
| CCcont | 0.055 | 0.746 |
| DS01 | 0.556 | -0.056 |
| DS02 | 0.307 | -0.274 |
| DS04 | 1.016 | -1.228 |
| DS0c | -0.892 | -0.052 |
| GP01 | -0.443 | -0.396 |
| GP02 | -1.282 | 0.255 |
| GP0c | 0.28 | -0.614 |
| NOD | -0.334 | -1.147 |
| NZO | 0.146 | -1.019 |
| PWK | 0.402 | -1.159 |
| H37Rv_KO_CtpC | 1.197 | -0.12 |
| H37Rv_KO_CtpD | -1.952 | -0.03 |
| H37Rv_KO_Rv1272 | -0.936 | -1.022 |
| H37Rv_KO_SugABC | 0.084 | 0.286 |
| H37Rv_KO_MbtN | 0.594 | -0.85 |
| Trans05 | -2.013 | -1.147 |
| macrophage_unactivated | -1.989 | -0.489 |
| IL1 | -0.955 | -0.658 |
| Rapamycin | -0.43 | 0.178 |
| Tcell | -0.958 | 0.094 |
| GMCSF | -1.486 | 0.227 |
| IFNab | -0.067 | -0.372 |
| IFNg | -1.593 | 0.0 |
| IFNg_GMCSF1 | 0.399 | -0.591 |
| Rv1432_day32 | 0.608 | 0.0 |
| Rv1565c_day32 | -0.218 | 0.0 |
| secA2_input | -0.704 | 0.0 |
| delta_Rv3594 | 1.019 | 0.646 |
| delta_Rv3717 | 1.136 | 0.505 |
| delta_Rv3811 | 0.807 | 0.752 |
| delta_Rv0954 | 0.04 | -0.115 |
| PonA1 | 0.963 | 0.653 |
| EccD1_KO | -0.257 | -1.016 |
| EspI_KO | -0.411 | -1.135 |
| PE35_KO | -0.995 | -1.228 |
| PPE68_KO | -0.793 | -0.921 |
| glycerol2 | 1.359 | 2.019 |
| lignocerate | 2.322 | 2.557 |
| oleate | 1.375 | -0.315 |
| phosphatidylcholine | 2.274 | 2.07 |
| acetate | 2.462 | 3.325 |
| glucAc | 2.004 | 2.617 |
| Rv0950ko | -0.513 | 1.668 |
| Rv1096ko | 1.161 | 0.875 |
| Rv3684ko | 0.783 | 0.684 |
| delta_otsA_trehalose | 0.778 | 0.079 |