Top 10 genes with highest correlation to Rv2208/cobS:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0995/rimJ | (cc=0.5895) | info on Rv0995/rimJ |
| Rv3323c/moaX | (cc=0.5874) | info on Rv3323c/moaX |
| Rv0488/- | (cc=0.5559) | info on Rv0488/- |
| Rv0593/lprL | (cc=0.5304) | info on Rv0593/lprL |
| Rv3287c/rsbW | (cc=0.5296) | info on Rv3287c/rsbW |
| Rv3353c/- | (cc=0.5283) | info on Rv3353c/- |
| Rv0312/- | (cc=0.52) | info on Rv0312/- |
| Rv0387c/- | (cc=0.519) | info on Rv0387c/- |
| Rv2237/- | (cc=0.5161) | info on Rv2237/- |
| Rv1198/esxL | (cc=0.5146) | info on Rv1198/esxL |
Correlation of Rv2208/cobS with Rv0995/rimJ
Normalized LFCs for Rv2208/cobS:
(description and provenance of datasets)
| Rv2208/cobS | Rv0995/rimJ | |
| Fe_supp_jason_reseq | 0.991 | -0.153 |
| low_pH_jason_reseq | -0.136 | -2.916 |
| NO_jason_reseq | -1.113 | -1.205 |
| B6_jason_reseq | -0.591 | -0.085 |
| MHCII_jason_reseq | -0.163 | 0.516 |
| Isoniazid02 | -1.937 | -3.312 |
| Rifampicin4 | -1.359 | -4.318 |
| Ethambutol3 | -2.013 | -2.203 |
| Meropenem3 | -2.443 | -4.081 |
| Vancomycin16 | -1.846 | -5.515 |
| Rv2680_day32 | -0.208 | 0.564 |
| H37Rv_KO_MarP | 0.104 | 2.697 |
| hypoxia_3wks | -0.666 | -1.683 |
| hypoxia_6wks | -1.631 | -2.322 |
| glycerol | 1.29 | 1.712 |
| cholesterol | 0.356 | 0.212 |
| AJ | 1.05 | 0.528 |
| Bibs02 | 0.813 | -0.909 |
| Bibs02c | 0.788 | -0.671 |
| BL6 | 0.32 | -1.044 |
| BL6a | -0.05 | -2.444 |
| BXD01 | -0.745 | -2.009 |
| BXD010 | -0.118 | -0.323 |
| BXD011 | -1.076 | -2.143 |
| BXD03 | -1.031 | -0.672 |
| BXD04 | -0.486 | -1.948 |
| BXD05 | -1.745 | -2.668 |
| BXD06 | -0.363 | -1.975 |
| BXD07 | -0.544 | -1.549 |
| BXD08 | -0.677 | -2.096 |
| BXD09 | -0.716 | -1.635 |
| CAST | -0.781 | 0.085 |
| CCcont | 0.055 | 0.842 |
| DS01 | 0.556 | 0.186 |
| DS02 | 0.307 | 1.038 |
| DS04 | 1.016 | -0.229 |
| DS0c | -0.892 | 1.651 |
| GP01 | -0.443 | 0.254 |
| GP02 | -1.282 | -1.134 |
| GP0c | 0.28 | -1.454 |
| NOD | -0.334 | 2.756 |
| NZO | 0.146 | -0.288 |
| PWK | 0.402 | -0.861 |
| H37Rv_KO_CtpC | 1.197 | 0.562 |
| H37Rv_KO_CtpD | -1.952 | -0.513 |
| H37Rv_KO_Rv1272 | -0.936 | -1.962 |
| H37Rv_KO_SugABC | 0.084 | -0.204 |
| H37Rv_KO_MbtN | 0.594 | -1.994 |
| Trans05 | -2.013 | -1.434 |
| macrophage_unactivated | -1.989 | -0.464 |
| IL1 | -0.955 | -2.21 |
| Rapamycin | -0.43 | -2.286 |
| Tcell | -0.958 | -2.18 |
| GMCSF | -1.486 | -3.028 |
| IFNab | -0.067 | -3.625 |
| IFNg | -1.593 | -2.55 |
| IFNg_GMCSF1 | 0.399 | -0.71 |
| Rv1432_day32 | 0.608 | -0.139 |
| Rv1565c_day32 | -0.218 | 2.685 |
| secA2_input | -0.704 | -0.049 |
| delta_Rv3594 | 1.019 | -0.364 |
| delta_Rv3717 | 1.136 | -1.807 |
| delta_Rv3811 | 0.807 | 0.135 |
| delta_Rv0954 | 0.04 | 1.467 |
| PonA1 | 0.963 | 0.651 |
| EccD1_KO | -0.257 | -1.246 |
| EspI_KO | -0.411 | 0.724 |
| PE35_KO | -0.995 | 0.423 |
| PPE68_KO | -0.793 | -1.961 |
| glycerol2 | 1.359 | 0.383 |
| lignocerate | 2.322 | 3.231 |
| oleate | 1.375 | -1.934 |
| phosphatidylcholine | 2.274 | 2.522 |
| acetate | 2.462 | 1.82 |
| glucAc | 2.004 | 1.876 |
| Rv0950ko | -0.513 | -0.1 |
| Rv1096ko | 1.161 | 0.464 |
| Rv3684ko | 0.783 | 1.251 |
| delta_otsA_trehalose | 0.778 | -0.788 |