Top 10 genes with highest correlation to Rv2185c/TB16.3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0502/- | (cc=0.8023) | info on Rv0502/- |
| Rv0644c/mmaA2 | (cc=0.6949) | info on Rv0644c/mmaA2 |
| Rv2184c/- | (cc=0.6843) | info on Rv2184c/- |
| Rv0642c/mmaA4 | (cc=0.6739) | info on Rv0642c/mmaA4 |
| Rv1683/- | (cc=0.6724) | info on Rv1683/- |
| Rv3050c/- | (cc=0.6646) | info on Rv3050c/- |
| Rv3842c/glpQ1 | (cc=0.6557) | info on Rv3842c/glpQ1 |
| Rv0425c/ctpH | (cc=0.6456) | info on Rv0425c/ctpH |
| Rv0501/galE2 | (cc=0.6446) | info on Rv0501/galE2 |
| Rv0211/pckA | (cc=0.6422) | info on Rv0211/pckA |
Correlation of Rv2185c/TB16.3 with Rv1683/-
Normalized LFCs for Rv2185c/TB16.3:
(description and provenance of datasets)
| Rv2185c/TB16.3 | Rv1683/- | |
| Fe_supp_jason_reseq | -0.701 | -1.097 |
| low_pH_jason_reseq | 0.07 | 1.116 |
| NO_jason_reseq | 3.145 | 1.89 |
| B6_jason_reseq | 0.585 | 0.26 |
| MHCII_jason_reseq | 0.741 | -0.897 |
| Isoniazid02 | 0.0 | 0.083 |
| Rifampicin4 | -0.477 | -0.872 |
| Ethambutol3 | 0.112 | -0.392 |
| Meropenem3 | 0.972 | -0.568 |
| Vancomycin16 | -0.395 | -1.051 |
| Rv2680_day32 | 0.824 | -1.252 |
| H37Rv_KO_MarP | 0.789 | 0.395 |
| hypoxia_3wks | 2.719 | -1.388 |
| hypoxia_6wks | 2.103 | -0.593 |
| glycerol | 0.767 | 0.544 |
| cholesterol | -0.064 | 0.39 |
| AJ | 1.114 | -0.65 |
| Bibs02 | 0.04 | -0.371 |
| Bibs02c | 0.045 | -0.424 |
| BL6 | 2.768 | 1.713 |
| BL6a | 2.642 | 1.771 |
| BXD01 | 3.504 | 2.314 |
| BXD010 | 1.842 | 1.619 |
| BXD011 | 2.894 | 2.729 |
| BXD03 | 2.304 | 0.849 |
| BXD04 | 2.256 | 0.933 |
| BXD05 | 2.403 | 1.652 |
| BXD06 | 2.823 | 1.954 |
| BXD07 | 3.21 | 2.564 |
| BXD08 | 2.579 | 2.081 |
| BXD09 | 3.357 | 2.057 |
| CAST | -0.439 | -0.646 |
| CCcont | 1.992 | 1.214 |
| DS01 | 0.631 | 0.0 |
| DS02 | 0.047 | -0.61 |
| DS04 | 0.676 | -0.883 |
| DS0c | 1.215 | 0.129 |
| GP01 | 0.883 | 2.033 |
| GP02 | 1.052 | 0.263 |
| GP0c | 1.959 | 2.249 |
| NOD | -0.88 | -0.456 |
| NZO | -0.134 | 0.0 |
| PWK | 0.163 | -0.257 |
| H37Rv_KO_CtpC | -0.856 | 0.847 |
| H37Rv_KO_CtpD | 0.818 | 1.197 |
| H37Rv_KO_Rv1272 | 2.161 | 1.297 |
| H37Rv_KO_SugABC | -0.357 | -0.278 |
| H37Rv_KO_MbtN | 1.098 | 1.095 |
| Trans05 | 1.263 | 3.916 |
| macrophage_unactivated | 0.761 | 0.139 |
| IL1 | -0.86 | 0.383 |
| Rapamycin | -0.206 | -0.436 |
| Tcell | 1.3 | 1.603 |
| GMCSF | -0.626 | -0.375 |
| IFNab | 0.671 | 0.263 |
| IFNg | -0.567 | -0.123 |
| IFNg_GMCSF1 | 0.135 | -0.292 |
| Rv1432_day32 | 2.759 | 0.924 |
| Rv1565c_day32 | -0.335 | 0.509 |
| secA2_input | 0.092 | 0.445 |
| delta_Rv3594 | 0.884 | 0.812 |
| delta_Rv3717 | 1.24 | 3.05 |
| delta_Rv3811 | 0.741 | 0.693 |
| delta_Rv0954 | -0.658 | -1.722 |
| PonA1 | -1.11 | -0.488 |
| EccD1_KO | -2.273 | -1.779 |
| EspI_KO | -1.526 | -1.734 |
| PE35_KO | -0.309 | -0.875 |
| PPE68_KO | -0.8 | -1.328 |
| glycerol2 | 2.172 | 0.705 |
| lignocerate | 0.082 | 0.613 |
| oleate | -0.373 | 0.713 |
| phosphatidylcholine | 0.183 | 0.311 |
| acetate | 1.485 | 1.76 |
| glucAc | 1.409 | 1.596 |
| Rv0950ko | -1.423 | -0.793 |
| Rv1096ko | -0.814 | 0.142 |
| Rv3684ko | -1.019 | 0.154 |
| delta_otsA_trehalose | -0.363 | 0.147 |