Top 10 genes with highest correlation to Rv2185c/TB16.3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0502/- | (cc=0.8023) | info on Rv0502/- |
| Rv0644c/mmaA2 | (cc=0.6949) | info on Rv0644c/mmaA2 |
| Rv2184c/- | (cc=0.6843) | info on Rv2184c/- |
| Rv0642c/mmaA4 | (cc=0.6739) | info on Rv0642c/mmaA4 |
| Rv1683/- | (cc=0.6724) | info on Rv1683/- |
| Rv3050c/- | (cc=0.6646) | info on Rv3050c/- |
| Rv3842c/glpQ1 | (cc=0.6557) | info on Rv3842c/glpQ1 |
| Rv0425c/ctpH | (cc=0.6456) | info on Rv0425c/ctpH |
| Rv0501/galE2 | (cc=0.6446) | info on Rv0501/galE2 |
| Rv0211/pckA | (cc=0.6422) | info on Rv0211/pckA |
Correlation of Rv2185c/TB16.3 with Rv0502/-
Normalized LFCs for Rv2185c/TB16.3:
(description and provenance of datasets)
| Rv2185c/TB16.3 | Rv0502/- | |
| Fe_supp_jason_reseq | -0.701 | 0.696 |
| low_pH_jason_reseq | 0.07 | 1.318 |
| NO_jason_reseq | 3.145 | 1.78 |
| B6_jason_reseq | 0.585 | -0.709 |
| MHCII_jason_reseq | 0.741 | 0.086 |
| Isoniazid02 | 0.0 | -0.332 |
| Rifampicin4 | -0.477 | 0.623 |
| Ethambutol3 | 0.112 | 0.023 |
| Meropenem3 | 0.972 | 0.289 |
| Vancomycin16 | -0.395 | -0.767 |
| Rv2680_day32 | 0.824 | 0.065 |
| H37Rv_KO_MarP | 0.789 | 0.608 |
| hypoxia_3wks | 2.719 | 2.544 |
| hypoxia_6wks | 2.103 | 1.639 |
| glycerol | 0.767 | 1.066 |
| cholesterol | -0.064 | 0.715 |
| AJ | 1.114 | 0.904 |
| Bibs02 | 0.04 | 0.199 |
| Bibs02c | 0.045 | 0.059 |
| BL6 | 2.768 | 1.258 |
| BL6a | 2.642 | 2.429 |
| BXD01 | 3.504 | 2.883 |
| BXD010 | 1.842 | 2.113 |
| BXD011 | 2.894 | 2.075 |
| BXD03 | 2.304 | 1.244 |
| BXD04 | 2.256 | 2.334 |
| BXD05 | 2.403 | 2.061 |
| BXD06 | 2.823 | 2.32 |
| BXD07 | 3.21 | 2.325 |
| BXD08 | 2.579 | 1.898 |
| BXD09 | 3.357 | 2.995 |
| CAST | -0.439 | -0.771 |
| CCcont | 1.992 | 2.029 |
| DS01 | 0.631 | 0.489 |
| DS02 | 0.047 | 0.55 |
| DS04 | 0.676 | 1.216 |
| DS0c | 1.215 | 0.823 |
| GP01 | 0.883 | 1.933 |
| GP02 | 1.052 | 1.699 |
| GP0c | 1.959 | 1.132 |
| NOD | -0.88 | -0.236 |
| NZO | -0.134 | 0.267 |
| PWK | 0.163 | -1.037 |
| H37Rv_KO_CtpC | -0.856 | 0.198 |
| H37Rv_KO_CtpD | 0.818 | 1.721 |
| H37Rv_KO_Rv1272 | 2.161 | 2.664 |
| H37Rv_KO_SugABC | -0.357 | 1.635 |
| H37Rv_KO_MbtN | 1.098 | 2.769 |
| Trans05 | 1.263 | 3.129 |
| macrophage_unactivated | 0.761 | 1.49 |
| IL1 | -0.86 | -1.797 |
| Rapamycin | -0.206 | -0.166 |
| Tcell | 1.3 | 1.411 |
| GMCSF | -0.626 | -0.23 |
| IFNab | 0.671 | 0.623 |
| IFNg | -0.567 | -0.676 |
| IFNg_GMCSF1 | 0.135 | -0.38 |
| Rv1432_day32 | 2.759 | 2.034 |
| Rv1565c_day32 | -0.335 | -1.219 |
| secA2_input | 0.092 | -0.471 |
| delta_Rv3594 | 0.884 | 0.74 |
| delta_Rv3717 | 1.24 | 1.886 |
| delta_Rv3811 | 0.741 | 1.108 |
| delta_Rv0954 | -0.658 | -1.868 |
| PonA1 | -1.11 | -1.487 |
| EccD1_KO | -2.273 | -1.075 |
| EspI_KO | -1.526 | -0.613 |
| PE35_KO | -0.309 | -1.654 |
| PPE68_KO | -0.8 | -1.494 |
| glycerol2 | 2.172 | 0.551 |
| lignocerate | 0.082 | -0.111 |
| oleate | -0.373 | 0.801 |
| phosphatidylcholine | 0.183 | -0.419 |
| acetate | 1.485 | 0.284 |
| glucAc | 1.409 | 0.006 |
| Rv0950ko | -1.423 | -1.01 |
| Rv1096ko | -0.814 | -1.439 |
| Rv3684ko | -1.019 | -1.061 |
| delta_otsA_trehalose | -0.363 | -0.207 |