Top 10 genes with highest correlation to Rv2183c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1336/cysM | (cc=0.572) | info on Rv1336/cysM |
| Rv1337/- | (cc=0.5715) | info on Rv1337/- |
| Rv3050c/- | (cc=0.5598) | info on Rv3050c/- |
| Rv2842c/- | (cc=0.5591) | info on Rv2842c/- |
| Rv1131/prpC | (cc=0.5458) | info on Rv1131/prpC |
| Rv3024c/trmU | (cc=0.5445) | info on Rv3024c/trmU |
| Rv0153c/ptbB | (cc=0.5387) | info on Rv0153c/ptbB |
| Rv0047c/- | (cc=0.5381) | info on Rv0047c/- |
| Rv3823c/mmpL8 | (cc=0.5374) | info on Rv3823c/mmpL8 |
| Rv1712/cmk | (cc=0.5373) | info on Rv1712/cmk |
Correlation of Rv2183c/- with Rv1336/cysM
Normalized LFCs for Rv2183c/-:
(description and provenance of datasets)
| Rv2183c/- | Rv1336/cysM | |
| Fe_supp_jason_reseq | -0.778 | 0.199 |
| low_pH_jason_reseq | 3.199 | 0.831 |
| NO_jason_reseq | 2.959 | 1.113 |
| B6_jason_reseq | -1.287 | 0.705 |
| MHCII_jason_reseq | -0.431 | -0.079 |
| Isoniazid02 | -0.21 | 1.385 |
| Rifampicin4 | 0.0 | 0.076 |
| Ethambutol3 | 0.34 | -0.593 |
| Meropenem3 | 0.403 | 0.628 |
| Vancomycin16 | -0.809 | 0.666 |
| Rv2680_day32 | 0.0 | 0.675 |
| H37Rv_KO_MarP | 0.086 | -0.425 |
| hypoxia_3wks | 0.845 | 2.213 |
| hypoxia_6wks | 0.372 | 4.042 |
| glycerol | 1.09 | -0.967 |
| cholesterol | -0.963 | 0.048 |
| AJ | -0.072 | -1.56 |
| Bibs02 | -0.371 | -1.444 |
| Bibs02c | -1.516 | -1.203 |
| BL6 | 3.345 | 1.43 |
| BL6a | 0.06 | 1.05 |
| BXD01 | 2.32 | 2.221 |
| BXD010 | 0.691 | 1.974 |
| BXD011 | 2.233 | 3.102 |
| BXD03 | 0.916 | 1.156 |
| BXD04 | 3.942 | 1.994 |
| BXD05 | 0.514 | 1.724 |
| BXD06 | 1.838 | 2.328 |
| BXD07 | 2.223 | 2.6 |
| BXD08 | 0.508 | 2.71 |
| BXD09 | 2.455 | 1.771 |
| CAST | -2.508 | -0.594 |
| CCcont | 1.104 | 0.248 |
| DS01 | -1.189 | -1.632 |
| DS02 | -0.889 | -1.306 |
| DS04 | 0.0 | -0.136 |
| DS0c | -1.092 | -1.194 |
| GP01 | 1.335 | 1.134 |
| GP02 | 0.204 | 0.251 |
| GP0c | 2.155 | 1.595 |
| NOD | -1.769 | -1.128 |
| NZO | -1.571 | 0.23 |
| PWK | -0.473 | -0.469 |
| H37Rv_KO_CtpC | -0.592 | -0.578 |
| H37Rv_KO_CtpD | -0.842 | 0.006 |
| H37Rv_KO_Rv1272 | 1.279 | 1.298 |
| H37Rv_KO_SugABC | 2.381 | 0.836 |
| H37Rv_KO_MbtN | 0.747 | 2.209 |
| Trans05 | 2.189 | 1.733 |
| macrophage_unactivated | -0.937 | -2.061 |
| IL1 | -1.133 | -0.163 |
| Rapamycin | -1.593 | -0.915 |
| Tcell | 0.0 | 0.29 |
| GMCSF | -0.275 | -1.428 |
| IFNab | -1.288 | 0.115 |
| IFNg | -0.58 | -0.901 |
| IFNg_GMCSF1 | -0.327 | -1.024 |
| Rv1432_day32 | 0.0 | 0.846 |
| Rv1565c_day32 | 0.638 | -1.439 |
| secA2_input | 1.011 | 0.227 |
| delta_Rv3594 | 0.577 | 0.858 |
| delta_Rv3717 | 1.242 | 2.129 |
| delta_Rv3811 | 1.81 | 1.103 |
| delta_Rv0954 | -2.149 | -0.291 |
| PonA1 | -0.788 | -0.995 |
| EccD1_KO | 1.842 | 0.22 |
| EspI_KO | 1.303 | 0.088 |
| PE35_KO | -0.613 | -0.715 |
| PPE68_KO | 0.448 | 0.016 |
| glycerol2 | -0.776 | -0.206 |
| lignocerate | -1.248 | -2.133 |
| oleate | -1.154 | 2.606 |
| phosphatidylcholine | -1.049 | -1.732 |
| acetate | -1.353 | -0.073 |
| glucAc | -1.113 | -0.255 |
| Rv0950ko | 0.712 | -0.633 |
| Rv1096ko | 0.271 | -0.305 |
| Rv3684ko | 2.397 | 0.308 |
| delta_otsA_trehalose | 0.67 | -0.053 |