Top 10 genes with highest correlation to Rv2177c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2424c/- | (cc=0.5495) | info on Rv2424c/- |
| Rv1263/amiB2 | (cc=0.5175) | info on Rv1263/amiB2 |
| Rv2786c/ribF | (cc=0.5033) | info on Rv2786c/ribF |
| Rv1527c/pks5 | (cc=0.4975) | info on Rv1527c/pks5 |
| Rv1531/- | (cc=0.4577) | info on Rv1531/- |
| Rv0359/- | (cc=0.4498) | info on Rv0359/- |
| Rv3691/- | (cc=0.4479) | info on Rv3691/- |
| Rv1004c/- | (cc=0.4475) | info on Rv1004c/- |
| Rv2016/- | (cc=0.4425) | info on Rv2016/- |
| Rv2464c/- | (cc=0.4376) | info on Rv2464c/- |
Correlation of Rv2177c/- with Rv2786c/ribF
Normalized LFCs for Rv2177c/-:
(description and provenance of datasets)
| Rv2177c/- | Rv2786c/ribF | |
| Fe_supp_jason_reseq | 0.011 | 0.527 |
| low_pH_jason_reseq | -1.226 | -0.877 |
| NO_jason_reseq | 0.302 | 0.746 |
| B6_jason_reseq | 0.386 | 0.315 |
| MHCII_jason_reseq | -0.305 | -0.804 |
| Isoniazid02 | -0.054 | 0.247 |
| Rifampicin4 | 1.162 | 0.46 |
| Ethambutol3 | 0.672 | 0.392 |
| Meropenem3 | 0.639 | 0.297 |
| Vancomycin16 | 0.504 | 0.451 |
| Rv2680_day32 | -0.169 | 0.0 |
| H37Rv_KO_MarP | -0.174 | -0.481 |
| hypoxia_3wks | 0.271 | -0.427 |
| hypoxia_6wks | 0.336 | -1.013 |
| glycerol | -0.312 | 0.325 |
| cholesterol | -0.143 | -0.89 |
| AJ | 0.948 | 1.543 |
| Bibs02 | -0.38 | -1.123 |
| Bibs02c | -0.394 | -0.55 |
| BL6 | -0.158 | -0.643 |
| BL6a | -0.205 | -0.244 |
| BXD01 | -0.61 | -0.8 |
| BXD010 | -0.632 | -0.787 |
| BXD011 | -0.555 | -0.076 |
| BXD03 | -0.386 | -0.831 |
| BXD04 | -0.057 | -0.76 |
| BXD05 | -0.039 | -0.827 |
| BXD06 | -0.068 | -0.687 |
| BXD07 | -0.227 | -0.851 |
| BXD08 | -0.352 | -0.684 |
| BXD09 | 0.067 | -0.477 |
| CAST | 0.494 | 1.86 |
| CCcont | -0.651 | -0.917 |
| DS01 | 0.417 | -0.802 |
| DS02 | 0.384 | 2.133 |
| DS04 | 1.362 | -0.115 |
| DS0c | -0.506 | 0.239 |
| GP01 | 1.28 | 0.561 |
| GP02 | 0.324 | 0.578 |
| GP0c | 1.16 | 1.493 |
| NOD | -0.028 | 0.675 |
| NZO | 0.88 | -0.845 |
| PWK | 0.861 | 1.584 |
| H37Rv_KO_CtpC | -0.189 | 1.398 |
| H37Rv_KO_CtpD | -0.601 | -0.778 |
| H37Rv_KO_Rv1272 | 0.397 | 1.139 |
| H37Rv_KO_SugABC | 0.481 | -0.608 |
| H37Rv_KO_MbtN | -1.489 | -0.633 |
| Trans05 | 1.047 | 0.908 |
| macrophage_unactivated | -0.887 | -0.761 |
| IL1 | -0.736 | -0.715 |
| Rapamycin | -0.126 | -0.353 |
| Tcell | -0.365 | -0.785 |
| GMCSF | 0.29 | -0.304 |
| IFNab | -0.538 | -0.348 |
| IFNg | -0.997 | -1.013 |
| IFNg_GMCSF1 | -0.352 | -0.361 |
| Rv1432_day32 | 0.245 | 0.0 |
| Rv1565c_day32 | -0.283 | 0.182 |
| secA2_input | 1.116 | 1.288 |
| delta_Rv3594 | -0.433 | -0.6 |
| delta_Rv3717 | -0.233 | -1.016 |
| delta_Rv3811 | -0.312 | -1.029 |
| delta_Rv0954 | -0.59 | -1.383 |
| PonA1 | -0.087 | -0.081 |
| EccD1_KO | -0.253 | 0.329 |
| EspI_KO | 0.225 | 0.55 |
| PE35_KO | -0.761 | 1.286 |
| PPE68_KO | -0.646 | 1.161 |
| glycerol2 | -0.017 | 0.0 |
| lignocerate | -0.029 | 0.0 |
| oleate | 0.301 | 0.0 |
| phosphatidylcholine | 0.283 | 0.0 |
| acetate | 0.735 | 0.63 |
| glucAc | 0.176 | 0.0 |
| Rv0950ko | -0.19 | -1.306 |
| Rv1096ko | -0.166 | -0.513 |
| Rv3684ko | -0.449 | -0.557 |
| delta_otsA_trehalose | -0.662 | 0.373 |