Top 10 genes with highest correlation to Rv2173/idsA2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2131c/cysQ | (cc=0.6269) | info on Rv2131c/cysQ |
| Rv1780/- | (cc=0.6052) | info on Rv1780/- |
| Rv0211/pckA | (cc=0.5832) | info on Rv0211/pckA |
| Rv1550/fadD11 | (cc=0.5384) | info on Rv1550/fadD11 |
| Rv0545c/pitA | (cc=0.5306) | info on Rv0545c/pitA |
| Rv3730c/- | (cc=0.5228) | info on Rv3730c/- |
| Rv0505c/serB1 | (cc=0.5143) | info on Rv0505c/serB1 |
| Rv1058/fadD14 | (cc=0.5103) | info on Rv1058/fadD14 |
| Rv2569c/- | (cc=0.5048) | info on Rv2569c/- |
| Rv2524c/fas | (cc=0.5039) | info on Rv2524c/fas |
Correlation of Rv2173/idsA2 with Rv1780/-
Normalized LFCs for Rv2173/idsA2:
(description and provenance of datasets)
| Rv2173/idsA2 | Rv1780/- | |
| Fe_supp_jason_reseq | 0.923 | -1.778 |
| low_pH_jason_reseq | 1.919 | -0.34 |
| NO_jason_reseq | 0.507 | -2.084 |
| B6_jason_reseq | 0.311 | -3.549 |
| MHCII_jason_reseq | 0.7 | -0.977 |
| Isoniazid02 | 2.372 | 2.506 |
| Rifampicin4 | 1.032 | -0.639 |
| Ethambutol3 | 4.543 | 1.978 |
| Meropenem3 | 0.53 | 0.727 |
| Vancomycin16 | 1.624 | -0.491 |
| Rv2680_day32 | 0.534 | 1.835 |
| H37Rv_KO_MarP | 1.744 | -0.267 |
| hypoxia_3wks | 1.83 | 1.288 |
| hypoxia_6wks | 3.092 | 3.454 |
| glycerol | 1.975 | 2.188 |
| cholesterol | 0.562 | 2.714 |
| AJ | -0.255 | -0.768 |
| Bibs02 | 0.348 | 1.197 |
| Bibs02c | 1.346 | 1.17 |
| BL6 | 2.79 | 1.216 |
| BL6a | 1.382 | 1.807 |
| BXD01 | 1.163 | 2.028 |
| BXD010 | 1.279 | 1.29 |
| BXD011 | 3.346 | 3.362 |
| BXD03 | 1.708 | 1.659 |
| BXD04 | 0.686 | 2.619 |
| BXD05 | 1.371 | 1.815 |
| BXD06 | 1.436 | 3.056 |
| BXD07 | 1.749 | 1.865 |
| BXD08 | 0.516 | 1.959 |
| BXD09 | 1.459 | 2.253 |
| CAST | -1.036 | -1.922 |
| CCcont | 1.366 | 0.954 |
| DS01 | 1.711 | 0.435 |
| DS02 | 0.318 | -1.03 |
| DS04 | 1.192 | 0.232 |
| DS0c | 0.993 | 0.74 |
| GP01 | 1.006 | 2.552 |
| GP02 | 1.278 | 2.909 |
| GP0c | 1.683 | 2.635 |
| NOD | -1.199 | -1.01 |
| NZO | -1.445 | -0.123 |
| PWK | -0.882 | -1.451 |
| H37Rv_KO_CtpC | -0.488 | 1.377 |
| H37Rv_KO_CtpD | 1.265 | -0.826 |
| H37Rv_KO_Rv1272 | 1.163 | 1.908 |
| H37Rv_KO_SugABC | 3.188 | 2.077 |
| H37Rv_KO_MbtN | 1.452 | 3.96 |
| Trans05 | 1.224 | 2.432 |
| macrophage_unactivated | -0.376 | -0.189 |
| IL1 | -0.605 | -1.264 |
| Rapamycin | 0.442 | -0.85 |
| Tcell | -0.388 | 2.444 |
| GMCSF | -0.422 | -1.009 |
| IFNab | 0.738 | 0.641 |
| IFNg | -1.042 | -1.732 |
| IFNg_GMCSF1 | -1.225 | -3.126 |
| Rv1432_day32 | -0.656 | 2.211 |
| Rv1565c_day32 | 0.0 | 1.35 |
| secA2_input | 0.459 | -1.45 |
| delta_Rv3594 | 1.274 | 1.334 |
| delta_Rv3717 | 1.81 | 2.956 |
| delta_Rv3811 | 2.152 | 1.866 |
| delta_Rv0954 | -0.068 | -1.335 |
| PonA1 | 0.089 | -2.652 |
| EccD1_KO | -0.138 | -2.993 |
| EspI_KO | -0.499 | -2.21 |
| PE35_KO | 0.455 | -2.634 |
| PPE68_KO | -0.134 | -2.102 |
| glycerol2 | 0.193 | 0.483 |
| lignocerate | 1.128 | 0.36 |
| oleate | 0.0 | 0.034 |
| phosphatidylcholine | 0.679 | 0.653 |
| acetate | 2.469 | -0.374 |
| glucAc | 1.481 | -0.518 |
| Rv0950ko | -1.58 | -2.783 |
| Rv1096ko | -1.716 | -3.685 |
| Rv3684ko | -0.779 | -2.731 |
| delta_otsA_trehalose | -2.335 | -1.034 |