Top 10 genes with highest correlation to Rv2159c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2741/PE_PGRS47 | (cc=0.5517) | info on Rv2741/PE_PGRS47 |
| Rv1838c/vapC13 | (cc=0.4861) | info on Rv1838c/vapC13 |
| Rv3084/lipR | (cc=0.4851) | info on Rv3084/lipR |
| Rv3651/- | (cc=0.4821) | info on Rv3651/- |
| Rv3736/- | (cc=0.4808) | info on Rv3736/- |
| Rv2628/- | (cc=0.4784) | info on Rv2628/- |
| Rv0428c/- | (cc=0.4749) | info on Rv0428c/- |
| Rv2490c/PE_PGRS43 | (cc=0.4733) | info on Rv2490c/PE_PGRS43 |
| Rv1759c/wag22 | (cc=0.4681) | info on Rv1759c/wag22 |
| Rv3832c/- | (cc=0.4586) | info on Rv3832c/- |
Correlation of Rv2159c/- with Rv3651/-
Normalized LFCs for Rv2159c/-:
(description and provenance of datasets)
| Rv2159c/- | Rv3651/- | |
| Fe_supp_jason_reseq | -0.663 | 0.923 |
| low_pH_jason_reseq | -0.482 | -0.979 |
| NO_jason_reseq | -0.294 | -2.625 |
| B6_jason_reseq | -1.212 | -0.496 |
| MHCII_jason_reseq | -0.206 | -0.503 |
| Isoniazid02 | -0.214 | -0.528 |
| Rifampicin4 | 0.891 | -1.584 |
| Ethambutol3 | -0.666 | -0.64 |
| Meropenem3 | -0.041 | 1.677 |
| Vancomycin16 | -0.785 | -0.828 |
| Rv2680_day32 | 0.098 | -0.883 |
| H37Rv_KO_MarP | -0.428 | 0.674 |
| hypoxia_3wks | -0.183 | -2.333 |
| hypoxia_6wks | -1.762 | -1.894 |
| glycerol | 1.754 | 2.73 |
| cholesterol | 0.807 | 1.434 |
| AJ | 1.434 | 0.918 |
| Bibs02 | 2.105 | 0.525 |
| Bibs02c | -0.133 | 1.682 |
| BL6 | -0.419 | -2.121 |
| BL6a | -0.57 | 0.63 |
| BXD01 | -0.468 | -1.751 |
| BXD010 | -1.168 | -2.715 |
| BXD011 | -0.739 | -2.35 |
| BXD03 | -0.637 | -1.959 |
| BXD04 | -0.265 | -2.187 |
| BXD05 | -0.111 | -2.282 |
| BXD06 | -0.666 | -2.463 |
| BXD07 | -0.297 | -2.348 |
| BXD08 | -0.103 | -1.202 |
| BXD09 | -0.34 | -2.036 |
| CAST | -0.224 | 0.297 |
| CCcont | -0.182 | -0.318 |
| DS01 | 0.765 | 2.156 |
| DS02 | 1.306 | 2.046 |
| DS04 | 0.989 | 1.941 |
| DS0c | -0.211 | 2.549 |
| GP01 | 1.236 | 0.873 |
| GP02 | 2.055 | -0.752 |
| GP0c | 0.781 | -0.255 |
| NOD | -0.197 | 1.206 |
| NZO | 1.341 | -0.172 |
| PWK | -0.071 | 0.18 |
| H37Rv_KO_CtpC | 0.202 | -0.459 |
| H37Rv_KO_CtpD | 1.017 | -0.358 |
| H37Rv_KO_Rv1272 | -0.991 | -2.989 |
| H37Rv_KO_SugABC | -1.371 | -1.491 |
| H37Rv_KO_MbtN | -0.028 | -1.493 |
| Trans05 | -0.406 | -2.769 |
| macrophage_unactivated | -0.72 | -0.35 |
| IL1 | 0.466 | -1.284 |
| Rapamycin | -0.015 | -2.047 |
| Tcell | -0.847 | -1.906 |
| GMCSF | 0.071 | -0.958 |
| IFNab | 0.067 | -1.533 |
| IFNg | -0.978 | -1.783 |
| IFNg_GMCSF1 | 0.38 | 0.0 |
| Rv1432_day32 | 0.566 | -0.632 |
| Rv1565c_day32 | -0.513 | 0.706 |
| secA2_input | 0.98 | 0.736 |
| delta_Rv3594 | 0.835 | 0.938 |
| delta_Rv3717 | -0.181 | 0.384 |
| delta_Rv3811 | 1.435 | -0.129 |
| delta_Rv0954 | -0.027 | 2.766 |
| PonA1 | 0.895 | 0.77 |
| EccD1_KO | 2.71 | 0.77 |
| EspI_KO | 1.349 | 1.243 |
| PE35_KO | 1.73 | 2.051 |
| PPE68_KO | 1.213 | 0.749 |
| glycerol2 | 0.794 | -0.588 |
| lignocerate | 0.168 | -0.605 |
| oleate | 0.679 | -0.819 |
| phosphatidylcholine | 0.326 | -0.296 |
| acetate | -0.426 | 0.326 |
| glucAc | -0.147 | -0.686 |
| Rv0950ko | -0.73 | -0.217 |
| Rv1096ko | 0.639 | 1.279 |
| Rv3684ko | 0.134 | 1.3 |
| delta_otsA_trehalose | -0.482 | 1.864 |