Top 10 genes with highest correlation to Rv2159c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2741/PE_PGRS47 | (cc=0.5517) | info on Rv2741/PE_PGRS47 |
| Rv1838c/vapC13 | (cc=0.4861) | info on Rv1838c/vapC13 |
| Rv3084/lipR | (cc=0.4851) | info on Rv3084/lipR |
| Rv3651/- | (cc=0.4821) | info on Rv3651/- |
| Rv3736/- | (cc=0.4808) | info on Rv3736/- |
| Rv2628/- | (cc=0.4784) | info on Rv2628/- |
| Rv0428c/- | (cc=0.4749) | info on Rv0428c/- |
| Rv2490c/PE_PGRS43 | (cc=0.4733) | info on Rv2490c/PE_PGRS43 |
| Rv1759c/wag22 | (cc=0.4681) | info on Rv1759c/wag22 |
| Rv3832c/- | (cc=0.4586) | info on Rv3832c/- |
Correlation of Rv2159c/- with Rv1838c/vapC13
Normalized LFCs for Rv2159c/-:
(description and provenance of datasets)
| Rv2159c/- | Rv1838c/vapC13 | |
| Fe_supp_jason_reseq | -0.663 | 0.268 |
| low_pH_jason_reseq | -0.482 | -1.65 |
| NO_jason_reseq | -0.294 | -0.465 |
| B6_jason_reseq | -1.212 | -0.765 |
| MHCII_jason_reseq | -0.206 | 0.325 |
| Isoniazid02 | -0.214 | -0.079 |
| Rifampicin4 | 0.891 | -0.26 |
| Ethambutol3 | -0.666 | 0.559 |
| Meropenem3 | -0.041 | 0.066 |
| Vancomycin16 | -0.785 | -1.321 |
| Rv2680_day32 | 0.098 | -0.59 |
| H37Rv_KO_MarP | -0.428 | -0.045 |
| hypoxia_3wks | -0.183 | -0.387 |
| hypoxia_6wks | -1.762 | -0.04 |
| glycerol | 1.754 | 0.554 |
| cholesterol | 0.807 | 0.531 |
| AJ | 1.434 | 0.664 |
| Bibs02 | 2.105 | 0.465 |
| Bibs02c | -0.133 | -0.367 |
| BL6 | -0.419 | -1.175 |
| BL6a | -0.57 | -0.568 |
| BXD01 | -0.468 | -1.176 |
| BXD010 | -1.168 | -1.085 |
| BXD011 | -0.739 | -0.65 |
| BXD03 | -0.637 | -0.666 |
| BXD04 | -0.265 | -0.932 |
| BXD05 | -0.111 | -0.602 |
| BXD06 | -0.666 | -0.958 |
| BXD07 | -0.297 | -0.208 |
| BXD08 | -0.103 | -0.989 |
| BXD09 | -0.34 | -0.639 |
| CAST | -0.224 | -0.482 |
| CCcont | -0.182 | -0.563 |
| DS01 | 0.765 | 0.929 |
| DS02 | 1.306 | 0.63 |
| DS04 | 0.989 | 0.696 |
| DS0c | -0.211 | 0.165 |
| GP01 | 1.236 | 1.255 |
| GP02 | 2.055 | -0.457 |
| GP0c | 0.781 | -0.014 |
| NOD | -0.197 | 0.22 |
| NZO | 1.341 | 0.363 |
| PWK | -0.071 | 0.172 |
| H37Rv_KO_CtpC | 0.202 | 0.191 |
| H37Rv_KO_CtpD | 1.017 | 0.384 |
| H37Rv_KO_Rv1272 | -0.991 | -0.108 |
| H37Rv_KO_SugABC | -1.371 | -0.078 |
| H37Rv_KO_MbtN | -0.028 | -0.421 |
| Trans05 | -0.406 | -0.038 |
| macrophage_unactivated | -0.72 | -0.956 |
| IL1 | 0.466 | 0.264 |
| Rapamycin | -0.015 | 0.399 |
| Tcell | -0.847 | -0.824 |
| GMCSF | 0.071 | 0.143 |
| IFNab | 0.067 | -0.998 |
| IFNg | -0.978 | 0.839 |
| IFNg_GMCSF1 | 0.38 | -0.094 |
| Rv1432_day32 | 0.566 | 0.213 |
| Rv1565c_day32 | -0.513 | 0.39 |
| secA2_input | 0.98 | 0.25 |
| delta_Rv3594 | 0.835 | 0.508 |
| delta_Rv3717 | -0.181 | -0.244 |
| delta_Rv3811 | 1.435 | -0.201 |
| delta_Rv0954 | -0.027 | 0.229 |
| PonA1 | 0.895 | 0.473 |
| EccD1_KO | 2.71 | 0.829 |
| EspI_KO | 1.349 | 1.092 |
| PE35_KO | 1.73 | 0.064 |
| PPE68_KO | 1.213 | 0.765 |
| glycerol2 | 0.794 | 1.007 |
| lignocerate | 0.168 | 1.325 |
| oleate | 0.679 | -0.196 |
| phosphatidylcholine | 0.326 | 1.109 |
| acetate | -0.426 | 0.449 |
| glucAc | -0.147 | 0.59 |
| Rv0950ko | -0.73 | 0.458 |
| Rv1096ko | 0.639 | 0.145 |
| Rv3684ko | 0.134 | 0.282 |
| delta_otsA_trehalose | -0.482 | -0.033 |