Top 10 genes with highest correlation to Rv2159c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2741/PE_PGRS47 | (cc=0.5517) | info on Rv2741/PE_PGRS47 |
Rv1838c/vapC13 | (cc=0.4861) | info on Rv1838c/vapC13 |
Rv3084/lipR | (cc=0.4851) | info on Rv3084/lipR |
Rv3651/- | (cc=0.4821) | info on Rv3651/- |
Rv3736/- | (cc=0.4808) | info on Rv3736/- |
Rv2628/- | (cc=0.4784) | info on Rv2628/- |
Rv0428c/- | (cc=0.4749) | info on Rv0428c/- |
Rv2490c/PE_PGRS43 | (cc=0.4733) | info on Rv2490c/PE_PGRS43 |
Rv1759c/wag22 | (cc=0.4681) | info on Rv1759c/wag22 |
Rv3832c/- | (cc=0.4586) | info on Rv3832c/- |
Correlation of Rv2159c/- with Rv2741/PE_PGRS47
Normalized LFCs for Rv2159c/-:
(description and provenance of datasets)
Rv2159c/- | Rv2741/PE_PGRS47 | |
Fe_supp_jason_reseq | -0.663 | -1.435 |
low_pH_jason_reseq | -0.482 | -1.683 |
NO_jason_reseq | -0.294 | -0.719 |
B6_jason_reseq | -1.212 | 0.291 |
MHCII_jason_reseq | -0.206 | 1.197 |
Isoniazid02 | -0.214 | -0.143 |
Rifampicin4 | 0.891 | 0.225 |
Ethambutol3 | -0.666 | 0.344 |
Meropenem3 | -0.041 | 0.43 |
Vancomycin16 | -0.785 | 0.098 |
Rv2680_day32 | 0.098 | 0.415 |
H37Rv_KO_MarP | -0.428 | -0.251 |
hypoxia_3wks | -0.183 | -0.869 |
hypoxia_6wks | -1.762 | -0.971 |
glycerol | 1.754 | -0.105 |
cholesterol | 0.807 | 0.0 |
AJ | 1.434 | 0.087 |
Bibs02 | 2.105 | 0.548 |
Bibs02c | -0.133 | 0.461 |
BL6 | -0.419 | -1.25 |
BL6a | -0.57 | -0.532 |
BXD01 | -0.468 | -0.626 |
BXD010 | -1.168 | -0.078 |
BXD011 | -0.739 | -0.691 |
BXD03 | -0.637 | -0.752 |
BXD04 | -0.265 | -0.645 |
BXD05 | -0.111 | -0.438 |
BXD06 | -0.666 | -0.961 |
BXD07 | -0.297 | -0.702 |
BXD08 | -0.103 | -0.871 |
BXD09 | -0.34 | -0.666 |
CAST | -0.224 | 0.467 |
CCcont | -0.182 | -1.508 |
DS01 | 0.765 | 0.257 |
DS02 | 1.306 | 0.61 |
DS04 | 0.989 | 0.672 |
DS0c | -0.211 | 0.434 |
GP01 | 1.236 | 0.75 |
GP02 | 2.055 | 1.507 |
GP0c | 0.781 | -0.028 |
NOD | -0.197 | 0.226 |
NZO | 1.341 | 0.131 |
PWK | -0.071 | 0.182 |
H37Rv_KO_CtpC | 0.202 | -0.481 |
H37Rv_KO_CtpD | 1.017 | 0.783 |
H37Rv_KO_Rv1272 | -0.991 | 0.163 |
H37Rv_KO_SugABC | -1.371 | -0.866 |
H37Rv_KO_MbtN | -0.028 | -0.39 |
Trans05 | -0.406 | -0.387 |
macrophage_unactivated | -0.72 | -1.203 |
IL1 | 0.466 | -0.819 |
Rapamycin | -0.015 | -0.746 |
Tcell | -0.847 | -1.124 |
GMCSF | 0.071 | -0.177 |
IFNab | 0.067 | -0.834 |
IFNg | -0.978 | -1.577 |
IFNg_GMCSF1 | 0.38 | 0.0 |
Rv1432_day32 | 0.566 | 0.329 |
Rv1565c_day32 | -0.513 | -0.392 |
secA2_input | 0.98 | 0.16 |
delta_Rv3594 | 0.835 | 0.722 |
delta_Rv3717 | -0.181 | 0.278 |
delta_Rv3811 | 1.435 | 0.181 |
delta_Rv0954 | -0.027 | 0.168 |
PonA1 | 0.895 | 0.009 |
EccD1_KO | 2.71 | 0.595 |
EspI_KO | 1.349 | 0.699 |
PE35_KO | 1.73 | 0.869 |
PPE68_KO | 1.213 | 1.165 |
glycerol2 | 0.794 | -0.673 |
lignocerate | 0.168 | -0.905 |
oleate | 0.679 | -0.189 |
phosphatidylcholine | 0.326 | -0.8 |
acetate | -0.426 | -0.798 |
glucAc | -0.147 | -0.255 |
Rv0950ko | -0.73 | 0.35 |
Rv1096ko | 0.639 | -0.534 |
Rv3684ko | 0.134 | 0.92 |
delta_otsA_trehalose | -0.482 | -0.53 |