Top 10 genes with highest correlation to Rv2101/helZ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2623/TB31.7 | (cc=0.5141) | info on Rv2623/TB31.7 |
| Rv2424c/- | (cc=0.4962) | info on Rv2424c/- |
| Rv1228/lpqX | (cc=0.491) | info on Rv1228/lpqX |
| Rv2359/zur | (cc=0.4902) | info on Rv2359/zur |
| Rv0745/- | (cc=0.4843) | info on Rv0745/- |
| Rv0348/- | (cc=0.4748) | info on Rv0348/- |
| Rv1108c/xseA | (cc=0.4734) | info on Rv1108c/xseA |
| Rv3754/tyrA | (cc=0.4711) | info on Rv3754/tyrA |
| Rv2559c/- | (cc=0.4695) | info on Rv2559c/- |
| Rv3055/- | (cc=0.4612) | info on Rv3055/- |
Correlation of Rv2101/helZ with Rv2359/zur
Normalized LFCs for Rv2101/helZ:
(description and provenance of datasets)
| Rv2101/helZ | Rv2359/zur | |
| Fe_supp_jason_reseq | -0.374 | 0.598 |
| low_pH_jason_reseq | -0.291 | 0.0 |
| NO_jason_reseq | 0.076 | 0.0 |
| B6_jason_reseq | -0.308 | 0.0 |
| MHCII_jason_reseq | 0.312 | 0.0 |
| Isoniazid02 | 0.418 | -0.146 |
| Rifampicin4 | 0.019 | -1.21 |
| Ethambutol3 | 0.696 | 1.156 |
| Meropenem3 | 1.858 | 0.217 |
| Vancomycin16 | 0.138 | -1.552 |
| Rv2680_day32 | 0.281 | 0.0 |
| H37Rv_KO_MarP | -0.253 | -0.272 |
| hypoxia_3wks | -0.299 | 0.0 |
| hypoxia_6wks | -0.524 | 0.0 |
| glycerol | 0.161 | -0.385 |
| cholesterol | -0.005 | 0.435 |
| AJ | 0.2 | -0.442 |
| Bibs02 | -0.273 | -0.348 |
| Bibs02c | -0.25 | -0.191 |
| BL6 | 0.037 | -0.238 |
| BL6a | -0.438 | -0.377 |
| BXD01 | 0.067 | -0.248 |
| BXD010 | -0.126 | 0.107 |
| BXD011 | -0.288 | -0.243 |
| BXD03 | -0.331 | -0.258 |
| BXD04 | 0.493 | 0.103 |
| BXD05 | 0.064 | -0.256 |
| BXD06 | -0.211 | -0.254 |
| BXD07 | -0.213 | -0.264 |
| BXD08 | 0.243 | -0.121 |
| BXD09 | -0.337 | -0.268 |
| CAST | 0.118 | 0.0 |
| CCcont | -0.172 | 0.797 |
| DS01 | 0.284 | -0.216 |
| DS02 | 0.43 | -0.414 |
| DS04 | 0.304 | -0.177 |
| DS0c | -0.008 | -0.198 |
| GP01 | 0.583 | -0.188 |
| GP02 | 0.564 | -0.159 |
| GP0c | 0.25 | -0.248 |
| NOD | -0.203 | -0.428 |
| NZO | 0.124 | -0.38 |
| PWK | 0.345 | -0.374 |
| H37Rv_KO_CtpC | -0.036 | -0.309 |
| H37Rv_KO_CtpD | -0.14 | 0.106 |
| H37Rv_KO_Rv1272 | 0.558 | 0.227 |
| H37Rv_KO_SugABC | 0.044 | 0.159 |
| H37Rv_KO_MbtN | -0.218 | 0.0 |
| Trans05 | 0.251 | 0.476 |
| macrophage_unactivated | -0.716 | 0.0 |
| IL1 | -0.128 | 0.0 |
| Rapamycin | -0.267 | 0.0 |
| Tcell | -0.179 | 0.0 |
| GMCSF | 0.0 | 0.0 |
| IFNab | -0.054 | 0.0 |
| IFNg | -0.214 | 0.0 |
| IFNg_GMCSF1 | 0.0 | 0.0 |
| Rv1432_day32 | -0.643 | 0.0 |
| Rv1565c_day32 | 0.093 | 0.766 |
| secA2_input | 0.463 | 0.992 |
| delta_Rv3594 | 0.418 | -0.369 |
| delta_Rv3717 | 0.344 | -0.303 |
| delta_Rv3811 | 0.265 | -0.358 |
| delta_Rv0954 | 0.367 | 2.396 |
| PonA1 | 0.185 | 0.876 |
| EccD1_KO | 1.276 | 1.003 |
| EspI_KO | 0.525 | 1.748 |
| PE35_KO | 1.132 | 2.917 |
| PPE68_KO | 1.206 | 3.59 |
| glycerol2 | 0.268 | 0.0 |
| lignocerate | 0.593 | 0.0 |
| oleate | 0.101 | 0.0 |
| phosphatidylcholine | 0.676 | 0.0 |
| acetate | 0.033 | 0.0 |
| glucAc | 0.18 | 0.0 |
| Rv0950ko | -0.268 | -1.143 |
| Rv1096ko | -0.953 | -0.929 |
| Rv3684ko | -0.58 | -1.739 |
| delta_otsA_trehalose | 0.254 | -0.218 |