Top 10 genes with highest correlation to Rv2038c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2147c/- | (cc=0.6834) | info on Rv2147c/- |
| Rv1583c/- | (cc=0.6311) | info on Rv1583c/- |
| Rv1548c/PPE21 | (cc=0.6053) | info on Rv1548c/PPE21 |
| Rv1526c/- | (cc=0.5712) | info on Rv1526c/- |
| Rv3036c/TB22.2 | (cc=0.5468) | info on Rv3036c/TB22.2 |
| Rv1076/lipU | (cc=0.5395) | info on Rv1076/lipU |
| Rv2575/- | (cc=0.5238) | info on Rv2575/- |
| Rv2480c/- | (cc=0.5213) | info on Rv2480c/- |
| Rv0188/- | (cc=0.5166) | info on Rv0188/- |
| Rv2929/- | (cc=0.5144) | info on Rv2929/- |
Correlation of Rv2038c/- with Rv1583c/-
Normalized LFCs for Rv2038c/-:
(description and provenance of datasets)
| Rv2038c/- | Rv1583c/- | |
| Fe_supp_jason_reseq | -1.699 | 0.515 |
| low_pH_jason_reseq | -0.127 | 1.549 |
| NO_jason_reseq | -0.465 | 0.832 |
| B6_jason_reseq | -2.64 | -2.401 |
| MHCII_jason_reseq | -0.977 | -1.772 |
| Isoniazid02 | 0.115 | 0.789 |
| Rifampicin4 | -0.149 | 1.18 |
| Ethambutol3 | -0.067 | 0.676 |
| Meropenem3 | -0.321 | -0.246 |
| Vancomycin16 | 0.21 | 0.324 |
| Rv2680_day32 | -1.358 | -1.26 |
| H37Rv_KO_MarP | 0.207 | 0.107 |
| hypoxia_3wks | -0.183 | -0.977 |
| hypoxia_6wks | 1.462 | 0.672 |
| glycerol | -1.252 | 0.0 |
| cholesterol | -1.217 | -0.46 |
| AJ | -0.494 | -1.071 |
| Bibs02 | -1.537 | -0.991 |
| Bibs02c | -0.591 | 0.743 |
| BL6 | 1.212 | 3.191 |
| BL6a | 0.106 | 1.936 |
| BXD01 | -0.074 | 1.298 |
| BXD010 | 0.34 | 1.592 |
| BXD011 | 0.888 | 2.091 |
| BXD03 | 0.622 | 2.033 |
| BXD04 | 0.612 | 1.324 |
| BXD05 | 1.52 | 1.302 |
| BXD06 | 0.438 | 1.925 |
| BXD07 | 0.731 | 2.073 |
| BXD08 | 0.849 | 1.806 |
| BXD09 | 0.979 | 1.625 |
| CAST | 0.184 | 0.736 |
| CCcont | 0.764 | 2.504 |
| DS01 | -0.936 | 0.962 |
| DS02 | -1.575 | 0.054 |
| DS04 | -0.225 | 1.612 |
| DS0c | -0.251 | -1.798 |
| GP01 | 1.204 | 1.857 |
| GP02 | 0.544 | 1.808 |
| GP0c | 0.598 | 2.036 |
| NOD | -0.404 | 0.797 |
| NZO | 0.306 | 0.673 |
| PWK | -0.627 | -0.905 |
| H37Rv_KO_CtpC | 0.087 | 1.404 |
| H37Rv_KO_CtpD | 1.034 | 3.186 |
| H37Rv_KO_Rv1272 | 1.002 | 0.795 |
| H37Rv_KO_SugABC | 0.784 | 1.851 |
| H37Rv_KO_MbtN | 1.145 | 0.987 |
| Trans05 | 2.398 | 1.01 |
| macrophage_unactivated | -0.246 | 0.559 |
| IL1 | 1.397 | 0.0 |
| Rapamycin | -0.239 | 0.862 |
| Tcell | 0.544 | 0.469 |
| GMCSF | 0.38 | 0.805 |
| IFNab | 0.834 | -0.115 |
| IFNg | 0.738 | 1.219 |
| IFNg_GMCSF1 | 0.93 | 0.537 |
| Rv1432_day32 | -0.614 | 1.454 |
| Rv1565c_day32 | 0.096 | 0.526 |
| secA2_input | -0.504 | -0.227 |
| delta_Rv3594 | 0.035 | -1.637 |
| delta_Rv3717 | -0.218 | -0.945 |
| delta_Rv3811 | 0.034 | -0.448 |
| delta_Rv0954 | -0.864 | -0.472 |
| PonA1 | -2.363 | -0.396 |
| EccD1_KO | 0.914 | 2.088 |
| EspI_KO | -0.257 | 1.141 |
| PE35_KO | 0.187 | 1.523 |
| PPE68_KO | -0.678 | 1.638 |
| glycerol2 | 0.607 | 1.813 |
| lignocerate | 1.538 | 2.527 |
| oleate | -1.418 | -2.562 |
| phosphatidylcholine | 0.531 | 1.909 |
| acetate | 1.998 | 2.818 |
| glucAc | 1.735 | 2.145 |
| Rv0950ko | -1.049 | 0.826 |
| Rv1096ko | 0.0 | -1.197 |
| Rv3684ko | -0.727 | -1.251 |
| delta_otsA_trehalose | 0.087 | 0.204 |