Top 10 genes with highest correlation to Rv2038c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2147c/- | (cc=0.6834) | info on Rv2147c/- |
| Rv1583c/- | (cc=0.6311) | info on Rv1583c/- |
| Rv1548c/PPE21 | (cc=0.6053) | info on Rv1548c/PPE21 |
| Rv1526c/- | (cc=0.5712) | info on Rv1526c/- |
| Rv3036c/TB22.2 | (cc=0.5468) | info on Rv3036c/TB22.2 |
| Rv1076/lipU | (cc=0.5395) | info on Rv1076/lipU |
| Rv2575/- | (cc=0.5238) | info on Rv2575/- |
| Rv2480c/- | (cc=0.5213) | info on Rv2480c/- |
| Rv0188/- | (cc=0.5166) | info on Rv0188/- |
| Rv2929/- | (cc=0.5144) | info on Rv2929/- |
Correlation of Rv2038c/- with Rv0188/-
Normalized LFCs for Rv2038c/-:
(description and provenance of datasets)
| Rv2038c/- | Rv0188/- | |
| Fe_supp_jason_reseq | -1.699 | -0.766 |
| low_pH_jason_reseq | -0.127 | 0.268 |
| NO_jason_reseq | -0.465 | 0.801 |
| B6_jason_reseq | -2.64 | -0.538 |
| MHCII_jason_reseq | -0.977 | 0.058 |
| Isoniazid02 | 0.115 | -0.412 |
| Rifampicin4 | -0.149 | 0.211 |
| Ethambutol3 | -0.067 | -0.218 |
| Meropenem3 | -0.321 | 0.793 |
| Vancomycin16 | 0.21 | -0.167 |
| Rv2680_day32 | -1.358 | -0.618 |
| H37Rv_KO_MarP | 0.207 | 0.452 |
| hypoxia_3wks | -0.183 | -0.291 |
| hypoxia_6wks | 1.462 | -0.311 |
| glycerol | -1.252 | -1.26 |
| cholesterol | -1.217 | -1.501 |
| AJ | -0.494 | -0.548 |
| Bibs02 | -1.537 | -1.481 |
| Bibs02c | -0.591 | -0.862 |
| BL6 | 1.212 | 1.733 |
| BL6a | 0.106 | 0.862 |
| BXD01 | -0.074 | 1.395 |
| BXD010 | 0.34 | 1.117 |
| BXD011 | 0.888 | 0.854 |
| BXD03 | 0.622 | 0.881 |
| BXD04 | 0.612 | 1.39 |
| BXD05 | 1.52 | 1.424 |
| BXD06 | 0.438 | 1.469 |
| BXD07 | 0.731 | 1.263 |
| BXD08 | 0.849 | 2.603 |
| BXD09 | 0.979 | 1.275 |
| CAST | 0.184 | 0.257 |
| CCcont | 0.764 | 1.593 |
| DS01 | -0.936 | -0.263 |
| DS02 | -1.575 | -0.75 |
| DS04 | -0.225 | 0.045 |
| DS0c | -0.251 | -1.307 |
| GP01 | 1.204 | 1.934 |
| GP02 | 0.544 | -0.574 |
| GP0c | 0.598 | 0.225 |
| NOD | -0.404 | -0.107 |
| NZO | 0.306 | 0.285 |
| PWK | -0.627 | -0.27 |
| H37Rv_KO_CtpC | 0.087 | -0.078 |
| H37Rv_KO_CtpD | 1.034 | -0.994 |
| H37Rv_KO_Rv1272 | 1.002 | 0.828 |
| H37Rv_KO_SugABC | 0.784 | 0.735 |
| H37Rv_KO_MbtN | 1.145 | 1.059 |
| Trans05 | 2.398 | 1.637 |
| macrophage_unactivated | -0.246 | 0.739 |
| IL1 | 1.397 | -0.896 |
| Rapamycin | -0.239 | -0.724 |
| Tcell | 0.544 | -0.368 |
| GMCSF | 0.38 | 0.364 |
| IFNab | 0.834 | -0.054 |
| IFNg | 0.738 | -0.746 |
| IFNg_GMCSF1 | 0.93 | 0.195 |
| Rv1432_day32 | -0.614 | -0.026 |
| Rv1565c_day32 | 0.096 | -0.494 |
| secA2_input | -0.504 | -0.43 |
| delta_Rv3594 | 0.035 | -1.205 |
| delta_Rv3717 | -0.218 | -0.76 |
| delta_Rv3811 | 0.034 | -0.848 |
| delta_Rv0954 | -0.864 | -0.665 |
| PonA1 | -2.363 | -1.947 |
| EccD1_KO | 0.914 | 0.569 |
| EspI_KO | -0.257 | -0.394 |
| PE35_KO | 0.187 | -0.21 |
| PPE68_KO | -0.678 | 0.793 |
| glycerol2 | 0.607 | 0.879 |
| lignocerate | 1.538 | 0.693 |
| oleate | -1.418 | 0.549 |
| phosphatidylcholine | 0.531 | 0.704 |
| acetate | 1.998 | 0.411 |
| glucAc | 1.735 | -0.008 |
| Rv0950ko | -1.049 | 0.09 |
| Rv1096ko | 0.0 | 1.191 |
| Rv3684ko | -0.727 | 1.192 |
| delta_otsA_trehalose | 0.087 | -0.811 |