Top 10 genes with highest correlation to Rv2010/vapC15:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3069/- | (cc=0.5865) | info on Rv3069/- |
| Rv2322c/rocD1 | (cc=0.5313) | info on Rv2322c/rocD1 |
| Rv3622c/PE32 | (cc=0.5081) | info on Rv3622c/PE32 |
| Rv2628/- | (cc=0.4979) | info on Rv2628/- |
| Rv2313c/- | (cc=0.497) | info on Rv2313c/- |
| Rv2458/mmuM | (cc=0.4932) | info on Rv2458/mmuM |
| Rv0330c/- | (cc=0.4813) | info on Rv0330c/- |
| Rv1899c/lppD | (cc=0.4723) | info on Rv1899c/lppD |
| Rv1148c/- | (cc=0.4721) | info on Rv1148c/- |
| Rv2688c/- | (cc=0.4566) | info on Rv2688c/- |
Correlation of Rv2010/vapC15 with Rv2628/-
Normalized LFCs for Rv2010/vapC15:
(description and provenance of datasets)
| Rv2010/vapC15 | Rv2628/- | |
| Fe_supp_jason_reseq | -0.161 | -1.787 |
| low_pH_jason_reseq | 0.214 | 0.023 |
| NO_jason_reseq | 0.0 | 1.62 |
| B6_jason_reseq | -0.023 | 1.163 |
| MHCII_jason_reseq | -0.247 | 1.063 |
| Isoniazid02 | -1.924 | -3.054 |
| Rifampicin4 | -1.809 | -1.481 |
| Ethambutol3 | -1.902 | -2.505 |
| Meropenem3 | -1.904 | -2.876 |
| Vancomycin16 | -1.531 | -2.274 |
| Rv2680_day32 | -0.969 | 0.108 |
| H37Rv_KO_MarP | 0.213 | 0.27 |
| hypoxia_3wks | -0.339 | -0.849 |
| hypoxia_6wks | -0.958 | -1.888 |
| glycerol | -0.034 | -0.363 |
| cholesterol | -0.149 | -0.118 |
| AJ | 0.239 | 0.543 |
| Bibs02 | -0.419 | 1.574 |
| Bibs02c | -0.208 | -0.605 |
| BL6 | -0.176 | -0.818 |
| BL6a | -1.136 | -1.606 |
| BXD01 | -1.314 | -1.263 |
| BXD010 | -1.555 | -0.446 |
| BXD011 | -1.343 | -0.744 |
| BXD03 | -1.295 | -0.251 |
| BXD04 | -1.412 | -0.964 |
| BXD05 | -1.577 | -2.024 |
| BXD06 | -1.497 | -0.619 |
| BXD07 | -0.571 | -1.293 |
| BXD08 | -0.81 | -1.87 |
| BXD09 | -0.615 | -1.85 |
| CAST | -0.332 | -0.199 |
| CCcont | -2.214 | -1.891 |
| DS01 | -0.378 | 0.068 |
| DS02 | -0.6 | 0.641 |
| DS04 | -0.156 | -0.55 |
| DS0c | -1.062 | 0.482 |
| GP01 | -1.117 | -1.086 |
| GP02 | -0.133 | 0.595 |
| GP0c | 0.056 | -0.612 |
| NOD | 0.104 | -0.973 |
| NZO | -0.998 | 0.631 |
| PWK | -1.091 | 0.421 |
| H37Rv_KO_CtpC | -1.514 | -0.803 |
| H37Rv_KO_CtpD | -0.918 | -1.584 |
| H37Rv_KO_Rv1272 | -0.198 | -2.273 |
| H37Rv_KO_SugABC | 0.517 | -1.94 |
| H37Rv_KO_MbtN | -2.206 | -2.276 |
| Trans05 | 0.177 | -1.235 |
| macrophage_unactivated | 0.145 | -0.451 |
| IL1 | 0.899 | -0.258 |
| Rapamycin | 0.813 | -2.176 |
| Tcell | 1.342 | -0.228 |
| GMCSF | -0.19 | 2.878 |
| IFNab | 0.559 | -1.17 |
| IFNg | 0.959 | -0.091 |
| IFNg_GMCSF1 | 0.742 | -0.569 |
| Rv1432_day32 | 0.707 | 0.941 |
| Rv1565c_day32 | 1.54 | 0.736 |
| secA2_input | 1.39 | -0.059 |
| delta_Rv3594 | -0.881 | 0.668 |
| delta_Rv3717 | -0.839 | -0.82 |
| delta_Rv3811 | 0.342 | 0.064 |
| delta_Rv0954 | 0.037 | -0.842 |
| PonA1 | -0.446 | -0.753 |
| EccD1_KO | 1.536 | 3.088 |
| EspI_KO | 1.138 | 1.668 |
| PE35_KO | -0.306 | 1.706 |
| PPE68_KO | 0.422 | 2.038 |
| glycerol2 | -0.331 | -0.614 |
| lignocerate | -0.887 | -0.822 |
| oleate | 0.641 | 0.414 |
| phosphatidylcholine | -0.265 | -0.35 |
| acetate | -1.012 | -1.686 |
| glucAc | -1.882 | -1.02 |
| Rv0950ko | -0.184 | 0.271 |
| Rv1096ko | -0.856 | 0.401 |
| Rv3684ko | -0.999 | -0.652 |
| delta_otsA_trehalose | 0.004 | -0.331 |