Top 10 genes with highest correlation to Rv2010/vapC15:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3069/- | (cc=0.5865) | info on Rv3069/- |
| Rv2322c/rocD1 | (cc=0.5313) | info on Rv2322c/rocD1 |
| Rv3622c/PE32 | (cc=0.5081) | info on Rv3622c/PE32 |
| Rv2628/- | (cc=0.4979) | info on Rv2628/- |
| Rv2313c/- | (cc=0.497) | info on Rv2313c/- |
| Rv2458/mmuM | (cc=0.4932) | info on Rv2458/mmuM |
| Rv0330c/- | (cc=0.4813) | info on Rv0330c/- |
| Rv1899c/lppD | (cc=0.4723) | info on Rv1899c/lppD |
| Rv1148c/- | (cc=0.4721) | info on Rv1148c/- |
| Rv2688c/- | (cc=0.4566) | info on Rv2688c/- |
Correlation of Rv2010/vapC15 with Rv0330c/-
Normalized LFCs for Rv2010/vapC15:
(description and provenance of datasets)
| Rv2010/vapC15 | Rv0330c/- | |
| Fe_supp_jason_reseq | -0.161 | -0.589 |
| low_pH_jason_reseq | 0.214 | -0.845 |
| NO_jason_reseq | 0.0 | 0.599 |
| B6_jason_reseq | -0.023 | 0.089 |
| MHCII_jason_reseq | -0.247 | -0.109 |
| Isoniazid02 | -1.924 | -1.12 |
| Rifampicin4 | -1.809 | 0.449 |
| Ethambutol3 | -1.902 | 0.557 |
| Meropenem3 | -1.904 | -1.634 |
| Vancomycin16 | -1.531 | -0.57 |
| Rv2680_day32 | -0.969 | -0.49 |
| H37Rv_KO_MarP | 0.213 | 0.715 |
| hypoxia_3wks | -0.339 | 0.183 |
| hypoxia_6wks | -0.958 | -0.025 |
| glycerol | -0.034 | 0.404 |
| cholesterol | -0.149 | 0.161 |
| AJ | 0.239 | 0.686 |
| Bibs02 | -0.419 | 0.507 |
| Bibs02c | -0.208 | 0.5 |
| BL6 | -0.176 | -0.251 |
| BL6a | -1.136 | 0.0 |
| BXD01 | -1.314 | -0.411 |
| BXD010 | -1.555 | -0.53 |
| BXD011 | -1.343 | -0.385 |
| BXD03 | -1.295 | -0.052 |
| BXD04 | -1.412 | -0.48 |
| BXD05 | -1.577 | -0.584 |
| BXD06 | -1.497 | -0.246 |
| BXD07 | -0.571 | -0.331 |
| BXD08 | -0.81 | -0.648 |
| BXD09 | -0.615 | -0.425 |
| CAST | -0.332 | -0.097 |
| CCcont | -2.214 | -0.41 |
| DS01 | -0.378 | 0.864 |
| DS02 | -0.6 | 0.55 |
| DS04 | -0.156 | -0.706 |
| DS0c | -1.062 | 0.519 |
| GP01 | -1.117 | 0.228 |
| GP02 | -0.133 | -0.206 |
| GP0c | 0.056 | -0.045 |
| NOD | 0.104 | 0.462 |
| NZO | -0.998 | -0.24 |
| PWK | -1.091 | -0.183 |
| H37Rv_KO_CtpC | -1.514 | -0.639 |
| H37Rv_KO_CtpD | -0.918 | -0.57 |
| H37Rv_KO_Rv1272 | -0.198 | -0.059 |
| H37Rv_KO_SugABC | 0.517 | -0.38 |
| H37Rv_KO_MbtN | -2.206 | -1.578 |
| Trans05 | 0.177 | 0.637 |
| macrophage_unactivated | 0.145 | 0.344 |
| IL1 | 0.899 | 0.578 |
| Rapamycin | 0.813 | 1.043 |
| Tcell | 1.342 | -0.244 |
| GMCSF | -0.19 | 0.966 |
| IFNab | 0.559 | 0.438 |
| IFNg | 0.959 | 0.676 |
| IFNg_GMCSF1 | 0.742 | 0.688 |
| Rv1432_day32 | 0.707 | 0.02 |
| Rv1565c_day32 | 1.54 | 1.057 |
| secA2_input | 1.39 | 1.14 |
| delta_Rv3594 | -0.881 | 0.213 |
| delta_Rv3717 | -0.839 | -0.204 |
| delta_Rv3811 | 0.342 | -0.141 |
| delta_Rv0954 | 0.037 | 0.162 |
| PonA1 | -0.446 | 0.87 |
| EccD1_KO | 1.536 | 0.668 |
| EspI_KO | 1.138 | -0.376 |
| PE35_KO | -0.306 | -0.242 |
| PPE68_KO | 0.422 | -0.352 |
| glycerol2 | -0.331 | -0.233 |
| lignocerate | -0.887 | 0.09 |
| oleate | 0.641 | -0.282 |
| phosphatidylcholine | -0.265 | -0.118 |
| acetate | -1.012 | -0.515 |
| glucAc | -1.882 | -0.226 |
| Rv0950ko | -0.184 | 0.35 |
| Rv1096ko | -0.856 | 1.025 |
| Rv3684ko | -0.999 | 0.966 |
| delta_otsA_trehalose | 0.004 | 0.664 |