Top 10 genes with highest correlation to Rv1991A/mazE6:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1565c/- | (cc=0.5028) | info on Rv1565c/- |
| Rv3875/esxA | (cc=0.4993) | info on Rv3875/esxA |
| Rv1583c/- | (cc=0.4939) | info on Rv1583c/- |
| Rv0489/gpm1 | (cc=0.4938) | info on Rv0489/gpm1 |
| Rv2960c/- | (cc=0.4619) | info on Rv2960c/- |
| Rv1498A/- | (cc=0.4498) | info on Rv1498A/- |
| Rv2680/- | (cc=0.447) | info on Rv2680/- |
| Rv2374c/hrcA | (cc=0.445) | info on Rv2374c/hrcA |
| Rv1561/vapC11 | (cc=0.4388) | info on Rv1561/vapC11 |
| Rv1896c/- | (cc=0.4329) | info on Rv1896c/- |
Correlation of Rv1991A/mazE6 with Rv3875/esxA
Normalized LFCs for Rv1991A/mazE6:
(description and provenance of datasets)
| Rv1991A/mazE6 | Rv3875/esxA | |
| Fe_supp_jason_reseq | 3.195 | 3.792 |
| low_pH_jason_reseq | 0.694 | -0.811 |
| NO_jason_reseq | -0.541 | 0.735 |
| B6_jason_reseq | -0.111 | -0.538 |
| MHCII_jason_reseq | -0.572 | -0.34 |
| Isoniazid02 | 0.314 | -0.583 |
| Rifampicin4 | 0.69 | 0.847 |
| Ethambutol3 | 2.83 | 0.423 |
| Meropenem3 | 0.756 | -0.165 |
| Vancomycin16 | 0.626 | 0.0 |
| Rv2680_day32 | 0.393 | -1.788 |
| H37Rv_KO_MarP | -0.744 | -1.552 |
| hypoxia_3wks | -0.486 | -0.451 |
| hypoxia_6wks | -0.839 | 0.472 |
| glycerol | 0.709 | -0.385 |
| cholesterol | -0.159 | -0.276 |
| AJ | -1.044 | -0.442 |
| Bibs02 | -0.823 | -0.348 |
| Bibs02c | -0.112 | -0.399 |
| BL6 | 1.907 | 1.362 |
| BL6a | 0.839 | 0.722 |
| BXD01 | 0.506 | 0.0 |
| BXD010 | 1.024 | 0.749 |
| BXD011 | 1.548 | 0.297 |
| BXD03 | 0.831 | 0.315 |
| BXD04 | 0.063 | 1.619 |
| BXD05 | 0.57 | 0.314 |
| BXD06 | 0.82 | 0.566 |
| BXD07 | 0.434 | 0.323 |
| BXD08 | 0.856 | -0.121 |
| BXD09 | 0.822 | 0.422 |
| CAST | -0.859 | -0.439 |
| CCcont | 1.741 | 2.921 |
| DS01 | 1.16 | -0.45 |
| DS02 | -1.161 | -0.414 |
| DS04 | 1.015 | -0.177 |
| DS0c | -0.976 | -0.413 |
| GP01 | 0.925 | 0.159 |
| GP02 | 0.511 | 0.303 |
| GP0c | 2.692 | 3.367 |
| NOD | 1.103 | -0.428 |
| NZO | -0.744 | -0.38 |
| PWK | 0.196 | -0.374 |
| H37Rv_KO_CtpC | 0.998 | -0.309 |
| H37Rv_KO_CtpD | 1.213 | 0.74 |
| H37Rv_KO_Rv1272 | -0.424 | 0.753 |
| H37Rv_KO_SugABC | 1.602 | -0.189 |
| H37Rv_KO_MbtN | 0.965 | 0.166 |
| Trans05 | 1.43 | 0.109 |
| macrophage_unactivated | -1.846 | -2.875 |
| IL1 | 0.0 | -0.706 |
| Rapamycin | 0.227 | -0.598 |
| Tcell | -0.43 | -3.082 |
| GMCSF | 0.259 | -0.985 |
| IFNab | -1.031 | 0.42 |
| IFNg | 0.0 | -3.138 |
| IFNg_GMCSF1 | 0.732 | -2.863 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | -2.195 | -2.754 |
| delta_Rv3594 | 0.895 | -1.392 |
| delta_Rv3717 | 0.429 | -0.464 |
| delta_Rv3811 | 0.617 | -1.289 |
| delta_Rv0954 | 2.719 | -2.109 |
| PonA1 | -1.829 | -3.038 |
| EccD1_KO | 0.483 | -2.003 |
| EspI_KO | -0.81 | -1.161 |
| PE35_KO | -0.23 | -0.213 |
| PPE68_KO | 2.24 | -0.563 |
| glycerol2 | 1.09 | 0.893 |
| lignocerate | 0.235 | 1.976 |
| oleate | -1.517 | -2.803 |
| phosphatidylcholine | 0.508 | 1.126 |
| acetate | 1.774 | 1.248 |
| glucAc | 1.515 | 1.54 |
| Rv0950ko | 0.072 | 2.063 |
| Rv1096ko | -0.793 | 0.256 |
| Rv3684ko | -0.327 | -0.295 |
| delta_otsA_trehalose | 0.369 | 0.0 |