Top 10 genes with highest correlation to Rv1989c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3638/- | (cc=0.5864) | info on Rv3638/- |
| Rv1734c/- | (cc=0.5817) | info on Rv1734c/- |
| Rv1735c/- | (cc=0.5603) | info on Rv1735c/- |
| Rv3294c/- | (cc=0.5534) | info on Rv3294c/- |
| Rv2385/mbtJ | (cc=0.5458) | info on Rv2385/mbtJ |
| Rv1467c/fadE15 | (cc=0.5429) | info on Rv1467c/fadE15 |
| Rv2917/- | (cc=0.5278) | info on Rv2917/- |
| Rv1736c/narX | (cc=0.5235) | info on Rv1736c/narX |
| Rv0089/- | (cc=0.5226) | info on Rv0089/- |
| Rv0840c/pip | (cc=0.5207) | info on Rv0840c/pip |
Correlation of Rv1989c/- with Rv1736c/narX
Normalized LFCs for Rv1989c/-:
(description and provenance of datasets)
| Rv1989c/- | Rv1736c/narX | |
| Fe_supp_jason_reseq | -0.633 | -0.802 |
| low_pH_jason_reseq | -0.243 | -0.196 |
| NO_jason_reseq | 0.446 | -0.244 |
| B6_jason_reseq | 0.514 | 0.903 |
| MHCII_jason_reseq | 0.217 | 1.098 |
| Isoniazid02 | 0.499 | 0.327 |
| Rifampicin4 | -0.915 | -0.168 |
| Ethambutol3 | 0.931 | 0.465 |
| Meropenem3 | -0.738 | 0.14 |
| Vancomycin16 | -0.26 | -0.082 |
| Rv2680_day32 | 0.615 | -0.104 |
| H37Rv_KO_MarP | 0.049 | -0.55 |
| hypoxia_3wks | -0.187 | -0.307 |
| hypoxia_6wks | -0.221 | -0.666 |
| glycerol | -1.791 | 0.151 |
| cholesterol | -0.893 | -0.154 |
| AJ | -0.034 | 0.044 |
| Bibs02 | 0.442 | -0.136 |
| Bibs02c | 0.138 | 0.327 |
| BL6 | -1.171 | -1.479 |
| BL6a | -0.36 | -0.555 |
| BXD01 | -0.451 | -1.376 |
| BXD010 | -1.432 | -0.816 |
| BXD011 | -0.947 | -0.692 |
| BXD03 | -0.586 | -1.244 |
| BXD04 | -0.24 | -1.002 |
| BXD05 | -0.529 | -0.764 |
| BXD06 | -1.085 | -1.228 |
| BXD07 | -0.764 | -0.846 |
| BXD08 | -0.912 | -1.271 |
| BXD09 | -0.975 | -1.412 |
| CAST | -0.087 | -0.704 |
| CCcont | -1.18 | -2.033 |
| DS01 | -0.05 | -0.104 |
| DS02 | 0.314 | 0.321 |
| DS04 | 0.008 | -0.259 |
| DS0c | -0.041 | -0.096 |
| GP01 | 0.022 | -0.354 |
| GP02 | 1.252 | 0.318 |
| GP0c | -0.335 | -0.75 |
| NOD | 0.221 | -0.504 |
| NZO | -0.452 | -0.234 |
| PWK | -0.121 | -0.097 |
| H37Rv_KO_CtpC | -0.824 | -1.316 |
| H37Rv_KO_CtpD | -0.613 | -1.77 |
| H37Rv_KO_Rv1272 | 0.126 | -0.766 |
| H37Rv_KO_SugABC | -0.039 | -2.014 |
| H37Rv_KO_MbtN | 0.025 | -0.384 |
| Trans05 | 0.533 | -0.349 |
| macrophage_unactivated | -0.546 | -0.764 |
| IL1 | -1.056 | -0.451 |
| Rapamycin | -1.114 | 0.196 |
| Tcell | -0.564 | -0.401 |
| GMCSF | -0.826 | -0.069 |
| IFNab | -0.602 | -0.547 |
| IFNg | 0.219 | -0.818 |
| IFNg_GMCSF1 | 0.053 | 0.355 |
| Rv1432_day32 | 0.493 | -0.554 |
| Rv1565c_day32 | 0.548 | 1.025 |
| secA2_input | -0.888 | -0.856 |
| delta_Rv3594 | 0.85 | 0.22 |
| delta_Rv3717 | 0.337 | 0.0 |
| delta_Rv3811 | 0.573 | 0.617 |
| delta_Rv0954 | 0.417 | 0.186 |
| PonA1 | 0.083 | -0.152 |
| EccD1_KO | 0.661 | -0.092 |
| EspI_KO | -0.114 | -0.374 |
| PE35_KO | 0.248 | 0.236 |
| PPE68_KO | -0.128 | -0.227 |
| glycerol2 | 0.083 | -0.685 |
| lignocerate | 0.153 | -0.312 |
| oleate | 0.349 | -0.554 |
| phosphatidylcholine | 0.218 | -0.27 |
| acetate | -0.472 | -0.321 |
| glucAc | -0.616 | -0.31 |
| Rv0950ko | 0.28 | 0.259 |
| Rv1096ko | 0.057 | 0.461 |
| Rv3684ko | -0.377 | 0.0 |
| delta_otsA_trehalose | 1.837 | 0.371 |