Top 10 genes with highest correlation to Rv1949c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0403c/mmpS1 | (cc=0.6195) | info on Rv0403c/mmpS1 |
| Rv1521/fadD25 | (cc=0.5944) | info on Rv1521/fadD25 |
| Rv1984c/cfp21 | (cc=0.5857) | info on Rv1984c/cfp21 |
| Rv2435c/- | (cc=0.577) | info on Rv2435c/- |
| Rv1871c/- | (cc=0.5509) | info on Rv1871c/- |
| Rv1215c/- | (cc=0.5463) | info on Rv1215c/- |
| Rv1861/- | (cc=0.5442) | info on Rv1861/- |
| Rv1504c/- | (cc=0.5404) | info on Rv1504c/- |
| Rv2545/vapB18 | (cc=0.5051) | info on Rv2545/vapB18 |
| Rv2957/- | (cc=0.5029) | info on Rv2957/- |
Correlation of Rv1949c/- with Rv1984c/cfp21
Normalized LFCs for Rv1949c/-:
(description and provenance of datasets)
| Rv1949c/- | Rv1984c/cfp21 | |
| Fe_supp_jason_reseq | 0.311 | 0.775 |
| low_pH_jason_reseq | -0.689 | -0.08 |
| NO_jason_reseq | 0.239 | -0.307 |
| B6_jason_reseq | -0.692 | -0.195 |
| MHCII_jason_reseq | -0.969 | -0.398 |
| Isoniazid02 | -0.113 | 0.14 |
| Rifampicin4 | -0.011 | -0.03 |
| Ethambutol3 | 0.047 | 0.339 |
| Meropenem3 | 0.629 | 0.258 |
| Vancomycin16 | -0.377 | -0.623 |
| Rv2680_day32 | 0.057 | -0.478 |
| H37Rv_KO_MarP | 0.48 | -0.358 |
| hypoxia_3wks | 0.303 | -0.215 |
| hypoxia_6wks | -0.547 | -0.695 |
| glycerol | -0.888 | -2.041 |
| cholesterol | 0.519 | -0.796 |
| AJ | -0.044 | -0.134 |
| Bibs02 | 0.258 | -0.244 |
| Bibs02c | -0.341 | 0.239 |
| BL6 | -0.195 | -0.179 |
| BL6a | -0.142 | 0.532 |
| BXD01 | 0.438 | 0.26 |
| BXD010 | -0.041 | 0.816 |
| BXD011 | 0.194 | 0.199 |
| BXD03 | 0.242 | 0.416 |
| BXD04 | 0.926 | 0.92 |
| BXD05 | 0.283 | 0.235 |
| BXD06 | 0.033 | 0.017 |
| BXD07 | 0.226 | 0.321 |
| BXD08 | 0.742 | 0.266 |
| BXD09 | 0.274 | 0.138 |
| CAST | 0.085 | -0.307 |
| CCcont | -0.573 | -0.551 |
| DS01 | 0.074 | -0.373 |
| DS02 | 0.041 | -0.377 |
| DS04 | -0.675 | -0.059 |
| DS0c | -0.402 | -0.226 |
| GP01 | 0.819 | 0.853 |
| GP02 | 0.762 | 0.353 |
| GP0c | -0.221 | 0.409 |
| NOD | -0.072 | -0.14 |
| NZO | 0.038 | -0.483 |
| PWK | -0.013 | -0.104 |
| H37Rv_KO_CtpC | 0.887 | 0.108 |
| H37Rv_KO_CtpD | 0.158 | 1.094 |
| H37Rv_KO_Rv1272 | 0.568 | 1.786 |
| H37Rv_KO_SugABC | 0.301 | 0.713 |
| H37Rv_KO_MbtN | 0.92 | 0.425 |
| Trans05 | 1.347 | 0.807 |
| macrophage_unactivated | 0.139 | 0.464 |
| IL1 | -0.792 | -0.053 |
| Rapamycin | -0.344 | 0.092 |
| Tcell | -0.15 | -0.137 |
| GMCSF | 0.364 | 0.079 |
| IFNab | -0.369 | -0.073 |
| IFNg | 0.024 | 0.436 |
| IFNg_GMCSF1 | -0.264 | 0.289 |
| Rv1432_day32 | 0.068 | 0.445 |
| Rv1565c_day32 | 0.019 | 0.567 |
| secA2_input | -0.753 | -0.78 |
| delta_Rv3594 | 0.044 | -0.147 |
| delta_Rv3717 | -0.059 | -0.551 |
| delta_Rv3811 | -0.123 | -0.604 |
| delta_Rv0954 | -0.69 | -0.466 |
| PonA1 | -0.125 | -0.905 |
| EccD1_KO | 0.158 | -0.474 |
| EspI_KO | -0.08 | 0.14 |
| PE35_KO | 0.099 | -0.012 |
| PPE68_KO | 0.067 | 0.074 |
| glycerol2 | 0.115 | -0.203 |
| lignocerate | -0.438 | -0.379 |
| oleate | 0.644 | 0.203 |
| phosphatidylcholine | 0.409 | 0.303 |
| acetate | -1.159 | -0.517 |
| glucAc | -1.522 | -1.067 |
| Rv0950ko | 0.075 | -0.286 |
| Rv1096ko | -0.995 | -1.463 |
| Rv3684ko | -0.305 | -0.088 |
| delta_otsA_trehalose | -0.338 | -1.63 |