Top 10 genes with highest correlation to Rv1949c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0403c/mmpS1 | (cc=0.6195) | info on Rv0403c/mmpS1 |
| Rv1521/fadD25 | (cc=0.5944) | info on Rv1521/fadD25 |
| Rv1984c/cfp21 | (cc=0.5857) | info on Rv1984c/cfp21 |
| Rv2435c/- | (cc=0.577) | info on Rv2435c/- |
| Rv1871c/- | (cc=0.5509) | info on Rv1871c/- |
| Rv1215c/- | (cc=0.5463) | info on Rv1215c/- |
| Rv1861/- | (cc=0.5442) | info on Rv1861/- |
| Rv1504c/- | (cc=0.5404) | info on Rv1504c/- |
| Rv2545/vapB18 | (cc=0.5051) | info on Rv2545/vapB18 |
| Rv2957/- | (cc=0.5029) | info on Rv2957/- |
Correlation of Rv1949c/- with Rv1871c/-
Normalized LFCs for Rv1949c/-:
(description and provenance of datasets)
| Rv1949c/- | Rv1871c/- | |
| Fe_supp_jason_reseq | 0.311 | -0.912 |
| low_pH_jason_reseq | -0.689 | -0.53 |
| NO_jason_reseq | 0.239 | 0.473 |
| B6_jason_reseq | -0.692 | -1.258 |
| MHCII_jason_reseq | -0.969 | -1.425 |
| Isoniazid02 | -0.113 | 1.439 |
| Rifampicin4 | -0.011 | 0.479 |
| Ethambutol3 | 0.047 | 0.428 |
| Meropenem3 | 0.629 | 0.461 |
| Vancomycin16 | -0.377 | 0.456 |
| Rv2680_day32 | 0.057 | -0.682 |
| H37Rv_KO_MarP | 0.48 | -0.285 |
| hypoxia_3wks | 0.303 | 0.75 |
| hypoxia_6wks | -0.547 | 0.073 |
| glycerol | -0.888 | -0.992 |
| cholesterol | 0.519 | -0.324 |
| AJ | -0.044 | -0.239 |
| Bibs02 | 0.258 | -0.36 |
| Bibs02c | -0.341 | -1.199 |
| BL6 | -0.195 | -0.055 |
| BL6a | -0.142 | -0.277 |
| BXD01 | 0.438 | -0.095 |
| BXD010 | -0.041 | 0.395 |
| BXD011 | 0.194 | 0.603 |
| BXD03 | 0.242 | -0.029 |
| BXD04 | 0.926 | -0.269 |
| BXD05 | 0.283 | 0.71 |
| BXD06 | 0.033 | 0.057 |
| BXD07 | 0.226 | 0.007 |
| BXD08 | 0.742 | 0.157 |
| BXD09 | 0.274 | -0.145 |
| CAST | 0.085 | 0.37 |
| CCcont | -0.573 | -0.471 |
| DS01 | 0.074 | -0.039 |
| DS02 | 0.041 | -0.501 |
| DS04 | -0.675 | -0.177 |
| DS0c | -0.402 | -0.277 |
| GP01 | 0.819 | 1.05 |
| GP02 | 0.762 | 0.11 |
| GP0c | -0.221 | 0.703 |
| NOD | -0.072 | 0.485 |
| NZO | 0.038 | -0.688 |
| PWK | -0.013 | -0.604 |
| H37Rv_KO_CtpC | 0.887 | 0.112 |
| H37Rv_KO_CtpD | 0.158 | 0.495 |
| H37Rv_KO_Rv1272 | 0.568 | 0.893 |
| H37Rv_KO_SugABC | 0.301 | 0.349 |
| H37Rv_KO_MbtN | 0.92 | 1.584 |
| Trans05 | 1.347 | 0.698 |
| macrophage_unactivated | 0.139 | 0.625 |
| IL1 | -0.792 | -0.403 |
| Rapamycin | -0.344 | 0.476 |
| Tcell | -0.15 | -0.345 |
| GMCSF | 0.364 | 0.869 |
| IFNab | -0.369 | 0.686 |
| IFNg | 0.024 | -0.168 |
| IFNg_GMCSF1 | -0.264 | 0.292 |
| Rv1432_day32 | 0.068 | -0.485 |
| Rv1565c_day32 | 0.019 | -0.009 |
| secA2_input | -0.753 | -0.994 |
| delta_Rv3594 | 0.044 | -1.137 |
| delta_Rv3717 | -0.059 | -1.158 |
| delta_Rv3811 | -0.123 | -0.758 |
| delta_Rv0954 | -0.69 | -0.908 |
| PonA1 | -0.125 | -1.138 |
| EccD1_KO | 0.158 | -0.306 |
| EspI_KO | -0.08 | 0.915 |
| PE35_KO | 0.099 | -0.184 |
| PPE68_KO | 0.067 | -0.074 |
| glycerol2 | 0.115 | 0.265 |
| lignocerate | -0.438 | -0.578 |
| oleate | 0.644 | 0.698 |
| phosphatidylcholine | 0.409 | 0.37 |
| acetate | -1.159 | -0.836 |
| glucAc | -1.522 | -1.325 |
| Rv0950ko | 0.075 | -0.874 |
| Rv1096ko | -0.995 | -1.378 |
| Rv3684ko | -0.305 | -0.707 |
| delta_otsA_trehalose | -0.338 | 0.11 |