Top 10 genes with highest correlation to Rv1944c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3410c/guaB3 | (cc=0.6104) | info on Rv3410c/guaB3 |
| Rv1215c/- | (cc=0.525) | info on Rv1215c/- |
| Rv1962A/vapB35 | (cc=0.504) | info on Rv1962A/vapB35 |
| Rv1697/- | (cc=0.5007) | info on Rv1697/- |
| Rv1785c/cyp143 | (cc=0.4725) | info on Rv1785c/cyp143 |
| Rv1552/frdA | (cc=0.4636) | info on Rv1552/frdA |
| Rv0988/- | (cc=0.4541) | info on Rv0988/- |
| Rv0013/trpG | (cc=0.4481) | info on Rv0013/trpG |
| Rv3665c/dppB | (cc=0.4409) | info on Rv3665c/dppB |
| Rv2677c/hemY | (cc=0.4353) | info on Rv2677c/hemY |
Correlation of Rv1944c/- with Rv3665c/dppB
Normalized LFCs for Rv1944c/-:
(description and provenance of datasets)
| Rv1944c/- | Rv3665c/dppB | |
| Fe_supp_jason_reseq | -0.614 | -0.365 |
| low_pH_jason_reseq | 2.561 | 2.515 |
| NO_jason_reseq | -0.788 | -1.982 |
| B6_jason_reseq | -0.807 | -2.162 |
| MHCII_jason_reseq | -1.64 | -1.4 |
| Isoniazid02 | 3.462 | -0.506 |
| Rifampicin4 | 0.173 | 0.165 |
| Ethambutol3 | 3.199 | 1.667 |
| Meropenem3 | 0.097 | -0.689 |
| Vancomycin16 | 0.17 | -0.111 |
| Rv2680_day32 | -0.039 | 0.573 |
| H37Rv_KO_MarP | 0.49 | -0.272 |
| hypoxia_3wks | -0.522 | 0.327 |
| hypoxia_6wks | 0.0 | -0.478 |
| glycerol | -0.614 | 0.654 |
| cholesterol | 0.946 | 0.854 |
| AJ | -0.97 | 0.751 |
| Bibs02 | 0.413 | 1.142 |
| Bibs02c | -0.67 | 0.474 |
| BL6 | 0.477 | 0.906 |
| BL6a | 0.044 | 0.062 |
| BXD01 | 0.734 | 0.0 |
| BXD010 | 0.605 | 0.8 |
| BXD011 | 0.323 | 0.078 |
| BXD03 | 0.133 | -0.135 |
| BXD04 | -0.627 | -0.524 |
| BXD05 | 1.216 | -0.636 |
| BXD06 | 0.314 | 0.233 |
| BXD07 | 0.549 | 0.279 |
| BXD08 | 0.925 | -0.442 |
| BXD09 | 0.196 | 0.488 |
| CAST | 0.367 | 1.185 |
| CCcont | 0.694 | 0.585 |
| DS01 | 0.282 | 0.975 |
| DS02 | 0.532 | 0.321 |
| DS04 | 0.252 | 1.744 |
| DS0c | 1.279 | 1.199 |
| GP01 | 0.843 | 0.699 |
| GP02 | 2.041 | -0.175 |
| GP0c | 1.277 | 0.834 |
| NOD | 0.944 | 0.205 |
| NZO | -0.517 | -0.663 |
| PWK | 1.269 | 0.0 |
| H37Rv_KO_CtpC | 1.205 | 1.949 |
| H37Rv_KO_CtpD | 0.344 | -0.316 |
| H37Rv_KO_Rv1272 | 1.093 | -1.067 |
| H37Rv_KO_SugABC | 0.768 | 1.302 |
| H37Rv_KO_MbtN | 0.08 | -0.715 |
| Trans05 | -0.126 | -1.5 |
| macrophage_unactivated | 0.9 | -0.593 |
| IL1 | -0.89 | -0.439 |
| Rapamycin | -0.387 | -1.099 |
| Tcell | 1.388 | 0.332 |
| GMCSF | -0.42 | -0.391 |
| IFNab | 0.514 | 0.502 |
| IFNg | -0.249 | -0.502 |
| IFNg_GMCSF1 | 0.273 | -1.266 |
| Rv1432_day32 | 1.073 | 0.0 |
| Rv1565c_day32 | 0.444 | 0.646 |
| secA2_input | 0.402 | -0.167 |
| delta_Rv3594 | -0.26 | -1.071 |
| delta_Rv3717 | 0.191 | -1.33 |
| delta_Rv3811 | -0.327 | -0.674 |
| delta_Rv0954 | 0.213 | -0.111 |
| PonA1 | 0.454 | -0.316 |
| EccD1_KO | 0.342 | -1.168 |
| EspI_KO | 0.328 | 0.493 |
| PE35_KO | 0.732 | -0.236 |
| PPE68_KO | -0.038 | -0.928 |
| glycerol2 | 0.548 | 0.261 |
| lignocerate | 0.258 | 0.06 |
| oleate | 0.525 | -0.345 |
| phosphatidylcholine | 0.978 | 0.492 |
| acetate | -0.279 | -0.216 |
| glucAc | -0.194 | -0.554 |
| Rv0950ko | -1.933 | -0.178 |
| Rv1096ko | -0.799 | 0.172 |
| Rv3684ko | -2.512 | -0.498 |
| delta_otsA_trehalose | -1.08 | -2.907 |