Top 10 genes with highest correlation to Rv1939/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv1123c/bpoB | (cc=0.5179) | info on Rv1123c/bpoB |
Rv2383c/mbtB | (cc=0.4955) | info on Rv2383c/mbtB |
Rv1064c/lpqV | (cc=0.4927) | info on Rv1064c/lpqV |
Rv3074/- | (cc=0.4927) | info on Rv3074/- |
Rv2297/- | (cc=0.4853) | info on Rv2297/- |
Rv3069/- | (cc=0.4849) | info on Rv3069/- |
Rv2980/- | (cc=0.4741) | info on Rv2980/- |
Rv2631/- | (cc=0.4731) | info on Rv2631/- |
Rv2250A/- | (cc=0.4726) | info on Rv2250A/- |
Rv2604c/snoP | (cc=0.467) | info on Rv2604c/snoP |
Correlation of Rv1939/- with Rv3069/-
Normalized LFCs for Rv1939/-:
(description and provenance of datasets)
Rv1939/- | Rv3069/- | |
Fe_supp_jason_reseq | -1.937 | -1.525 |
low_pH_jason_reseq | 1.032 | 1.111 |
NO_jason_reseq | 0.383 | 1.297 |
B6_jason_reseq | -0.487 | 0.619 |
MHCII_jason_reseq | -0.671 | 1.495 |
Isoniazid02 | 1.014 | -1.008 |
Rifampicin4 | 1.097 | -0.252 |
Ethambutol3 | 0.223 | -0.755 |
Meropenem3 | 1.052 | -0.182 |
Vancomycin16 | -0.106 | -0.621 |
Rv2680_day32 | 1.99 | -0.51 |
H37Rv_KO_MarP | -0.107 | 0.192 |
hypoxia_3wks | -0.459 | -0.072 |
hypoxia_6wks | -1.244 | 0.177 |
glycerol | -1.309 | 0.285 |
cholesterol | -0.218 | -0.383 |
AJ | 0.099 | 0.419 |
Bibs02 | -2.906 | 0.0 |
Bibs02c | -1.161 | 0.13 |
BL6 | -3.238 | -0.323 |
BL6a | -1.35 | -0.181 |
BXD01 | -0.888 | -0.851 |
BXD010 | -3.071 | -1.639 |
BXD011 | -1.418 | -0.678 |
BXD03 | -2.669 | -1.268 |
BXD04 | -1.917 | -1.815 |
BXD05 | -0.85 | -1.323 |
BXD06 | -2.122 | -0.494 |
BXD07 | -2.442 | -0.737 |
BXD08 | -3.189 | -1.247 |
BXD09 | -2.695 | -1.018 |
CAST | 0.232 | 0.073 |
CCcont | -3.716 | -1.539 |
DS01 | -1.571 | -0.01 |
DS02 | -0.739 | 0.2 |
DS04 | -1.528 | 0.129 |
DS0c | 0.643 | 0.416 |
GP01 | -2.556 | 1.214 |
GP02 | -2.154 | 1.65 |
GP0c | -2.727 | 0.68 |
NOD | -1.115 | -0.76 |
NZO | 0.468 | 0.036 |
PWK | 0.86 | 0.063 |
H37Rv_KO_CtpC | -0.901 | -0.248 |
H37Rv_KO_CtpD | -0.298 | -2.98 |
H37Rv_KO_Rv1272 | -0.68 | -0.39 |
H37Rv_KO_SugABC | -0.17 | -1.097 |
H37Rv_KO_MbtN | 0.312 | -1.025 |
Trans05 | 0.183 | 0.152 |
macrophage_unactivated | 2.781 | 1.297 |
IL1 | 0.0 | 1.536 |
Rapamycin | -0.491 | 0.865 |
Tcell | 3.617 | 1.87 |
GMCSF | 0.729 | 0.449 |
IFNab | -1.333 | 0.729 |
IFNg | 0.567 | 0.171 |
IFNg_GMCSF1 | 1.423 | 2.262 |
Rv1432_day32 | 0.087 | 0.249 |
Rv1565c_day32 | 1.309 | 1.652 |
secA2_input | 2.408 | -1.565 |
delta_Rv3594 | -2.533 | -0.968 |
delta_Rv3717 | -0.881 | -0.396 |
delta_Rv3811 | -0.912 | 0.079 |
delta_Rv0954 | -1.828 | 0.738 |
PonA1 | -2.246 | 0.299 |
EccD1_KO | 2.973 | 1.799 |
EspI_KO | 3.254 | 1.517 |
PE35_KO | 1.881 | 2.252 |
PPE68_KO | 3.257 | 1.987 |
glycerol2 | -3.357 | 0.025 |
lignocerate | -2.175 | -0.565 |
oleate | -1.26 | 0.496 |
phosphatidylcholine | -1.613 | 0.013 |
acetate | -1.81 | -1.275 |
glucAc | -3.434 | -1.298 |
Rv0950ko | -0.823 | -0.274 |
Rv1096ko | 1.288 | 0.872 |
Rv3684ko | -1.877 | -1.618 |
delta_otsA_trehalose | 0.066 | -0.087 |