Top 10 genes with highest correlation to Rv1929c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1780/- | (cc=0.4605) | info on Rv1780/- |
| Rv2266/cyp124 | (cc=0.3777) | info on Rv2266/cyp124 |
| Rv0644c/mmaA2 | (cc=0.3745) | info on Rv0644c/mmaA2 |
| Rv3181c/- | (cc=0.3703) | info on Rv3181c/- |
| Rv1554/frdC | (cc=0.3601) | info on Rv1554/frdC |
| Rv1552/frdA | (cc=0.3579) | info on Rv1552/frdA |
| Rv1058/fadD14 | (cc=0.355) | info on Rv1058/fadD14 |
| Rv0088/- | (cc=0.3404) | info on Rv0088/- |
| Rv2173/idsA2 | (cc=0.3362) | info on Rv2173/idsA2 |
| Rv3112/moaD1 | (cc=0.3346) | info on Rv3112/moaD1 |
Correlation of Rv1929c/- with Rv2266/cyp124
Normalized LFCs for Rv1929c/-:
(description and provenance of datasets)
| Rv1929c/- | Rv2266/cyp124 | |
| Fe_supp_jason_reseq | -1.299 | 0.152 |
| low_pH_jason_reseq | 0.142 | 0.398 |
| NO_jason_reseq | -0.845 | -0.685 |
| B6_jason_reseq | -0.601 | 0.624 |
| MHCII_jason_reseq | 0.576 | -0.08 |
| Isoniazid02 | 0.167 | -0.191 |
| Rifampicin4 | -0.054 | -0.057 |
| Ethambutol3 | 0.392 | -0.305 |
| Meropenem3 | -0.073 | 0.449 |
| Vancomycin16 | 0.106 | -0.17 |
| Rv2680_day32 | 1.782 | -0.363 |
| H37Rv_KO_MarP | 0.512 | -0.164 |
| hypoxia_3wks | 1.747 | 0.622 |
| hypoxia_6wks | 2.464 | 0.664 |
| glycerol | 0.521 | 0.149 |
| cholesterol | 0.898 | 0.0 |
| AJ | 0.165 | -0.237 |
| Bibs02 | 0.216 | 0.441 |
| Bibs02c | -0.182 | 0.953 |
| BL6 | -0.806 | -0.044 |
| BL6a | 0.178 | 0.366 |
| BXD01 | 1.214 | 0.044 |
| BXD010 | 0.441 | 0.053 |
| BXD011 | 1.22 | -0.651 |
| BXD03 | 0.775 | -0.16 |
| BXD04 | -0.18 | -0.689 |
| BXD05 | -0.742 | -0.373 |
| BXD06 | 0.812 | -0.106 |
| BXD07 | 1.003 | 0.24 |
| BXD08 | -0.086 | 0.198 |
| BXD09 | 0.98 | 0.058 |
| CAST | -0.148 | -0.439 |
| CCcont | -1.246 | -0.285 |
| DS01 | 0.098 | 0.409 |
| DS02 | -0.29 | -0.397 |
| DS04 | -0.97 | -0.097 |
| DS0c | 0.195 | 0.464 |
| GP01 | 1.263 | 0.405 |
| GP02 | 0.686 | 0.368 |
| GP0c | -0.027 | -0.871 |
| NOD | 0.225 | -0.355 |
| NZO | 0.397 | 0.014 |
| PWK | -0.02 | -0.617 |
| H37Rv_KO_CtpC | -0.581 | -0.867 |
| H37Rv_KO_CtpD | 0.064 | 0.263 |
| H37Rv_KO_Rv1272 | 0.598 | 0.966 |
| H37Rv_KO_SugABC | 1.188 | 0.593 |
| H37Rv_KO_MbtN | -1.162 | -0.277 |
| Trans05 | 1.007 | 0.613 |
| macrophage_unactivated | 1.228 | -0.363 |
| IL1 | -0.988 | -0.851 |
| Rapamycin | 0.436 | -0.092 |
| Tcell | 1.193 | -0.098 |
| GMCSF | -0.639 | -0.599 |
| IFNab | -1.007 | -0.907 |
| IFNg | -0.647 | -0.607 |
| IFNg_GMCSF1 | -1.48 | -1.474 |
| Rv1432_day32 | -0.279 | 0.471 |
| Rv1565c_day32 | 0.013 | 0.392 |
| secA2_input | -1.191 | -1.01 |
| delta_Rv3594 | 0.835 | 0.84 |
| delta_Rv3717 | -0.048 | 0.584 |
| delta_Rv3811 | 0.754 | 0.802 |
| delta_Rv0954 | -0.672 | 0.291 |
| PonA1 | -1.111 | -0.881 |
| EccD1_KO | -0.418 | 0.96 |
| EspI_KO | -0.508 | 0.653 |
| PE35_KO | 0.54 | 1.327 |
| PPE68_KO | 1.952 | 1.03 |
| glycerol2 | -0.497 | -0.356 |
| lignocerate | 4.317 | -0.247 |
| oleate | -0.459 | 0.081 |
| phosphatidylcholine | -0.528 | -0.394 |
| acetate | -1.503 | -0.256 |
| glucAc | -1.255 | -0.71 |
| Rv0950ko | -0.323 | -0.63 |
| Rv1096ko | -2.337 | -0.401 |
| Rv3684ko | -2.538 | 0.033 |
| delta_otsA_trehalose | -0.719 | -1.33 |