Top 10 genes with highest correlation to Rv1881c/lppE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2355/- | (cc=0.4696) | info on Rv2355/- |
| Rv2116/lppK | (cc=0.4552) | info on Rv2116/lppK |
| Rv0755A/- | (cc=0.4444) | info on Rv0755A/- |
| Rv0148/- | (cc=0.4348) | info on Rv0148/- |
| Rv1424c/- | (cc=0.4301) | info on Rv1424c/- |
| Rv3116/moeB2 | (cc=0.4205) | info on Rv3116/moeB2 |
| Rv1984c/cfp21 | (cc=0.412) | info on Rv1984c/cfp21 |
| Rv1917c/PPE34 | (cc=0.4107) | info on Rv1917c/PPE34 |
| Rv2649/- | (cc=0.4094) | info on Rv2649/- |
| Rv0796/- | (cc=0.399) | info on Rv0796/- |
Correlation of Rv1881c/lppE with Rv2116/lppK
Normalized LFCs for Rv1881c/lppE:
(description and provenance of datasets)
| Rv1881c/lppE | Rv2116/lppK | |
| Fe_supp_jason_reseq | 0.23 | -0.131 |
| low_pH_jason_reseq | -0.739 | -1.342 |
| NO_jason_reseq | 0.0 | -1.213 |
| B6_jason_reseq | 0.018 | -1.825 |
| MHCII_jason_reseq | 0.528 | -0.461 |
| Isoniazid02 | 0.298 | -0.159 |
| Rifampicin4 | 0.593 | 1.641 |
| Ethambutol3 | -0.058 | 1.351 |
| Meropenem3 | -0.025 | 0.726 |
| Vancomycin16 | 0.708 | 0.708 |
| Rv2680_day32 | 0.253 | -0.264 |
| H37Rv_KO_MarP | -0.24 | -0.951 |
| hypoxia_3wks | -0.116 | -0.431 |
| hypoxia_6wks | 0.271 | -1.004 |
| glycerol | -1.024 | -0.952 |
| cholesterol | -1.087 | -0.638 |
| AJ | 0.109 | -0.686 |
| Bibs02 | -0.056 | 0.491 |
| Bibs02c | 0.671 | 0.1 |
| BL6 | 0.769 | -0.752 |
| BL6a | 0.73 | -0.776 |
| BXD01 | 0.08 | -0.987 |
| BXD010 | 0.309 | -0.215 |
| BXD011 | 0.105 | -1.468 |
| BXD03 | -0.148 | -1.131 |
| BXD04 | 0.089 | -1.215 |
| BXD05 | -0.165 | -1.176 |
| BXD06 | -0.076 | -0.862 |
| BXD07 | 0.099 | -0.802 |
| BXD08 | 0.176 | -1.137 |
| BXD09 | -0.154 | -0.602 |
| CAST | 0.058 | -1.255 |
| CCcont | -0.279 | -0.378 |
| DS01 | 0.666 | 0.869 |
| DS02 | 1.134 | 1.271 |
| DS04 | 0.795 | 1.112 |
| DS0c | 0.709 | 1.006 |
| GP01 | 0.461 | -0.586 |
| GP02 | 0.737 | -1.205 |
| GP0c | 0.615 | -0.356 |
| NOD | 0.441 | -0.241 |
| NZO | 0.397 | -0.678 |
| PWK | -0.175 | -0.368 |
| H37Rv_KO_CtpC | -0.362 | -0.715 |
| H37Rv_KO_CtpD | 0.037 | 0.372 |
| H37Rv_KO_Rv1272 | 0.061 | -1.557 |
| H37Rv_KO_SugABC | 0.365 | -0.176 |
| H37Rv_KO_MbtN | 0.737 | 0.385 |
| Trans05 | 0.423 | -0.251 |
| macrophage_unactivated | 0.032 | 0.461 |
| IL1 | -0.03 | 0.389 |
| Rapamycin | -0.19 | 0.81 |
| Tcell | -0.202 | -0.785 |
| GMCSF | 0.702 | 0.219 |
| IFNab | -0.091 | 0.989 |
| IFNg | 0.094 | 0.802 |
| IFNg_GMCSF1 | 0.094 | 1.276 |
| Rv1432_day32 | -0.536 | -1.241 |
| Rv1565c_day32 | 0.54 | 0.894 |
| secA2_input | 0.097 | -0.507 |
| delta_Rv3594 | 0.09 | -1.277 |
| delta_Rv3717 | -0.395 | -1.528 |
| delta_Rv3811 | 0.364 | -0.515 |
| delta_Rv0954 | 0.455 | 0.158 |
| PonA1 | 0.102 | -0.587 |
| EccD1_KO | 0.016 | -0.405 |
| EspI_KO | 0.374 | -0.55 |
| PE35_KO | -0.114 | 0.158 |
| PPE68_KO | 0.035 | 0.147 |
| glycerol2 | -0.083 | -0.78 |
| lignocerate | -0.626 | -2.303 |
| oleate | 0.318 | -0.55 |
| phosphatidylcholine | -0.088 | -1.447 |
| acetate | -0.504 | -1.288 |
| glucAc | -0.442 | -1.573 |
| Rv0950ko | -0.38 | -0.543 |
| Rv1096ko | -0.992 | -0.896 |
| Rv3684ko | -1.205 | -0.645 |
| delta_otsA_trehalose | -1.649 | -1.533 |