Top 10 genes with highest correlation to Rv1868/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3190c/- | (cc=0.5045) | info on Rv3190c/- |
| Rv1289/- | (cc=0.4512) | info on Rv1289/- |
| Rv0768/aldA | (cc=0.4503) | info on Rv0768/aldA |
| Rv3225c/- | (cc=0.4302) | info on Rv3225c/- |
| Rv3310/sapM | (cc=0.4147) | info on Rv3310/sapM |
| Rv1156/- | (cc=0.4147) | info on Rv1156/- |
| Rv1228/lpqX | (cc=0.4122) | info on Rv1228/lpqX |
| Rv1774/- | (cc=0.4105) | info on Rv1774/- |
| Rv1251c/- | (cc=0.3999) | info on Rv1251c/- |
| Rv1467c/fadE15 | (cc=0.3996) | info on Rv1467c/fadE15 |
Correlation of Rv1868/- with Rv3225c/-
Normalized LFCs for Rv1868/-:
(description and provenance of datasets)
| Rv1868/- | Rv3225c/- | |
| Fe_supp_jason_reseq | -0.335 | 0.046 |
| low_pH_jason_reseq | -0.478 | -0.711 |
| NO_jason_reseq | 0.16 | 0.173 |
| B6_jason_reseq | 0.66 | 0.134 |
| MHCII_jason_reseq | 1.418 | 0.415 |
| Isoniazid02 | 0.678 | 0.271 |
| Rifampicin4 | -0.084 | -0.826 |
| Ethambutol3 | 0.111 | 0.134 |
| Meropenem3 | 0.629 | 0.098 |
| Vancomycin16 | -1.112 | -0.021 |
| Rv2680_day32 | -0.248 | 0.258 |
| H37Rv_KO_MarP | -0.078 | 0.339 |
| hypoxia_3wks | -0.08 | -0.215 |
| hypoxia_6wks | -0.042 | 0.192 |
| glycerol | -0.433 | -0.392 |
| cholesterol | -0.402 | 0.057 |
| AJ | -0.155 | -0.027 |
| Bibs02 | -0.543 | 0.072 |
| Bibs02c | 0.311 | 0.461 |
| BL6 | 0.453 | 0.21 |
| BL6a | 0.039 | -0.265 |
| BXD01 | -0.422 | -0.73 |
| BXD010 | -0.072 | -0.61 |
| BXD011 | -0.221 | -0.859 |
| BXD03 | -0.466 | -0.733 |
| BXD04 | -0.896 | -0.556 |
| BXD05 | -0.33 | -0.729 |
| BXD06 | -0.507 | -0.384 |
| BXD07 | -0.384 | -0.064 |
| BXD08 | -0.534 | -0.598 |
| BXD09 | -0.533 | -0.583 |
| CAST | 0.112 | 0.038 |
| CCcont | -0.76 | -0.229 |
| DS01 | 0.257 | -0.014 |
| DS02 | 0.397 | -0.181 |
| DS04 | -0.202 | 0.87 |
| DS0c | 0.226 | 0.247 |
| GP01 | 0.662 | 1.094 |
| GP02 | 1.257 | 0.869 |
| GP0c | 0.42 | -0.038 |
| NOD | 0.844 | 1.023 |
| NZO | -0.529 | -0.241 |
| PWK | 0.01 | 0.141 |
| H37Rv_KO_CtpC | -0.074 | 0.258 |
| H37Rv_KO_CtpD | -0.319 | -0.237 |
| H37Rv_KO_Rv1272 | 0.076 | -0.481 |
| H37Rv_KO_SugABC | 0.313 | 0.623 |
| H37Rv_KO_MbtN | -0.247 | -0.118 |
| Trans05 | 0.496 | -0.254 |
| macrophage_unactivated | -0.107 | -0.167 |
| IL1 | 0.38 | -0.222 |
| Rapamycin | 0.298 | 0.338 |
| Tcell | -0.456 | -0.499 |
| GMCSF | -0.066 | 0.026 |
| IFNab | -0.26 | -0.16 |
| IFNg | -0.278 | -0.171 |
| IFNg_GMCSF1 | -0.053 | 0.286 |
| Rv1432_day32 | 0.22 | 0.102 |
| Rv1565c_day32 | 0.689 | -0.014 |
| secA2_input | 0.463 | -0.114 |
| delta_Rv3594 | -0.043 | -0.211 |
| delta_Rv3717 | 0.188 | 0.063 |
| delta_Rv3811 | -0.07 | -0.015 |
| delta_Rv0954 | -0.025 | -0.39 |
| PonA1 | -0.111 | 0.624 |
| EccD1_KO | 0.691 | 0.253 |
| EspI_KO | 0.354 | -0.482 |
| PE35_KO | 0.274 | -0.117 |
| PPE68_KO | 0.397 | -0.163 |
| glycerol2 | -0.413 | -0.856 |
| lignocerate | 0.871 | -0.358 |
| oleate | -0.418 | -0.54 |
| phosphatidylcholine | 0.322 | -0.549 |
| acetate | 0.253 | -0.929 |
| glucAc | 0.51 | -0.294 |
| Rv0950ko | -0.923 | 0.238 |
| Rv1096ko | -0.299 | 0.172 |
| Rv3684ko | -0.324 | -0.154 |
| delta_otsA_trehalose | -0.705 | -0.467 |