Top 10 genes with highest correlation to Rv1868/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3190c/- | (cc=0.5045) | info on Rv3190c/- |
| Rv1289/- | (cc=0.4512) | info on Rv1289/- |
| Rv0768/aldA | (cc=0.4503) | info on Rv0768/aldA |
| Rv3225c/- | (cc=0.4302) | info on Rv3225c/- |
| Rv3310/sapM | (cc=0.4147) | info on Rv3310/sapM |
| Rv1156/- | (cc=0.4147) | info on Rv1156/- |
| Rv1228/lpqX | (cc=0.4122) | info on Rv1228/lpqX |
| Rv1774/- | (cc=0.4105) | info on Rv1774/- |
| Rv1251c/- | (cc=0.3999) | info on Rv1251c/- |
| Rv1467c/fadE15 | (cc=0.3996) | info on Rv1467c/fadE15 |
Correlation of Rv1868/- with Rv1228/lpqX
Normalized LFCs for Rv1868/-:
(description and provenance of datasets)
| Rv1868/- | Rv1228/lpqX | |
| Fe_supp_jason_reseq | -0.335 | -0.538 |
| low_pH_jason_reseq | -0.478 | -0.708 |
| NO_jason_reseq | 0.16 | -0.113 |
| B6_jason_reseq | 0.66 | 0.293 |
| MHCII_jason_reseq | 1.418 | -0.4 |
| Isoniazid02 | 0.678 | 0.8 |
| Rifampicin4 | -0.084 | -0.008 |
| Ethambutol3 | 0.111 | 1.6 |
| Meropenem3 | 0.629 | 0.714 |
| Vancomycin16 | -1.112 | -0.265 |
| Rv2680_day32 | -0.248 | -0.468 |
| H37Rv_KO_MarP | -0.078 | 0.251 |
| hypoxia_3wks | -0.08 | -0.06 |
| hypoxia_6wks | -0.042 | 0.192 |
| glycerol | -0.433 | 0.477 |
| cholesterol | -0.402 | -0.366 |
| AJ | -0.155 | 0.106 |
| Bibs02 | -0.543 | 0.301 |
| Bibs02c | 0.311 | -0.573 |
| BL6 | 0.453 | -0.277 |
| BL6a | 0.039 | -0.342 |
| BXD01 | -0.422 | -0.593 |
| BXD010 | -0.072 | -0.297 |
| BXD011 | -0.221 | -0.278 |
| BXD03 | -0.466 | -0.506 |
| BXD04 | -0.896 | -0.42 |
| BXD05 | -0.33 | -0.16 |
| BXD06 | -0.507 | -0.505 |
| BXD07 | -0.384 | 0.154 |
| BXD08 | -0.534 | -0.562 |
| BXD09 | -0.533 | -0.12 |
| CAST | 0.112 | -0.534 |
| CCcont | -0.76 | -0.306 |
| DS01 | 0.257 | -0.621 |
| DS02 | 0.397 | -0.381 |
| DS04 | -0.202 | 0.226 |
| DS0c | 0.226 | -0.198 |
| GP01 | 0.662 | 0.303 |
| GP02 | 1.257 | 0.887 |
| GP0c | 0.42 | -0.073 |
| NOD | 0.844 | -0.018 |
| NZO | -0.529 | 0.462 |
| PWK | 0.01 | 0.037 |
| H37Rv_KO_CtpC | -0.074 | -1.065 |
| H37Rv_KO_CtpD | -0.319 | -1.041 |
| H37Rv_KO_Rv1272 | 0.076 | 0.022 |
| H37Rv_KO_SugABC | 0.313 | 1.225 |
| H37Rv_KO_MbtN | -0.247 | -0.556 |
| Trans05 | 0.496 | 0.056 |
| macrophage_unactivated | -0.107 | -0.237 |
| IL1 | 0.38 | 0.169 |
| Rapamycin | 0.298 | -0.025 |
| Tcell | -0.456 | -0.283 |
| GMCSF | -0.066 | -0.032 |
| IFNab | -0.26 | -0.166 |
| IFNg | -0.278 | -0.233 |
| IFNg_GMCSF1 | -0.053 | -0.198 |
| Rv1432_day32 | 0.22 | 0.511 |
| Rv1565c_day32 | 0.689 | 0.161 |
| secA2_input | 0.463 | -0.066 |
| delta_Rv3594 | -0.043 | 0.597 |
| delta_Rv3717 | 0.188 | 0.934 |
| delta_Rv3811 | -0.07 | 0.635 |
| delta_Rv0954 | -0.025 | 1.355 |
| PonA1 | -0.111 | 0.833 |
| EccD1_KO | 0.691 | 0.793 |
| EspI_KO | 0.354 | 0.117 |
| PE35_KO | 0.274 | 0.79 |
| PPE68_KO | 0.397 | 0.186 |
| glycerol2 | -0.413 | 0.179 |
| lignocerate | 0.871 | 0.934 |
| oleate | -0.418 | 0.204 |
| phosphatidylcholine | 0.322 | 0.608 |
| acetate | 0.253 | 0.342 |
| glucAc | 0.51 | 0.435 |
| Rv0950ko | -0.923 | -0.639 |
| Rv1096ko | -0.299 | -0.935 |
| Rv3684ko | -0.324 | -0.662 |
| delta_otsA_trehalose | -0.705 | -0.722 |