Top 10 genes with highest correlation to Rv1868/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3190c/- | (cc=0.5045) | info on Rv3190c/- |
| Rv1289/- | (cc=0.4512) | info on Rv1289/- |
| Rv0768/aldA | (cc=0.4503) | info on Rv0768/aldA |
| Rv3225c/- | (cc=0.4302) | info on Rv3225c/- |
| Rv3310/sapM | (cc=0.4147) | info on Rv3310/sapM |
| Rv1156/- | (cc=0.4147) | info on Rv1156/- |
| Rv1228/lpqX | (cc=0.4122) | info on Rv1228/lpqX |
| Rv1774/- | (cc=0.4105) | info on Rv1774/- |
| Rv1251c/- | (cc=0.3999) | info on Rv1251c/- |
| Rv1467c/fadE15 | (cc=0.3996) | info on Rv1467c/fadE15 |
Correlation of Rv1868/- with Rv1156/-
Normalized LFCs for Rv1868/-:
(description and provenance of datasets)
| Rv1868/- | Rv1156/- | |
| Fe_supp_jason_reseq | -0.335 | 1.078 |
| low_pH_jason_reseq | -0.478 | 0.117 |
| NO_jason_reseq | 0.16 | 0.911 |
| B6_jason_reseq | 0.66 | 2.32 |
| MHCII_jason_reseq | 1.418 | 2.087 |
| Isoniazid02 | 0.678 | 0.451 |
| Rifampicin4 | -0.084 | 0.019 |
| Ethambutol3 | 0.111 | 1.796 |
| Meropenem3 | 0.629 | -0.156 |
| Vancomycin16 | -1.112 | 0.17 |
| Rv2680_day32 | -0.248 | 0.014 |
| H37Rv_KO_MarP | -0.078 | -0.531 |
| hypoxia_3wks | -0.08 | -0.295 |
| hypoxia_6wks | -0.042 | -0.05 |
| glycerol | -0.433 | -0.053 |
| cholesterol | -0.402 | -0.077 |
| AJ | -0.155 | 0.666 |
| Bibs02 | -0.543 | 0.889 |
| Bibs02c | 0.311 | 0.171 |
| BL6 | 0.453 | -0.456 |
| BL6a | 0.039 | -0.201 |
| BXD01 | -0.422 | -1.023 |
| BXD010 | -0.072 | -0.631 |
| BXD011 | -0.221 | -0.029 |
| BXD03 | -0.466 | -0.81 |
| BXD04 | -0.896 | -0.038 |
| BXD05 | -0.33 | 0.529 |
| BXD06 | -0.507 | -0.372 |
| BXD07 | -0.384 | -0.527 |
| BXD08 | -0.534 | -0.753 |
| BXD09 | -0.533 | -0.565 |
| CAST | 0.112 | 0.717 |
| CCcont | -0.76 | -1.017 |
| DS01 | 0.257 | 0.527 |
| DS02 | 0.397 | 1.152 |
| DS04 | -0.202 | 0.028 |
| DS0c | 0.226 | 0.646 |
| GP01 | 0.662 | 0.388 |
| GP02 | 1.257 | 1.962 |
| GP0c | 0.42 | -0.588 |
| NOD | 0.844 | 1.752 |
| NZO | -0.529 | 0.692 |
| PWK | 0.01 | 0.681 |
| H37Rv_KO_CtpC | -0.074 | -1.423 |
| H37Rv_KO_CtpD | -0.319 | -0.751 |
| H37Rv_KO_Rv1272 | 0.076 | -0.96 |
| H37Rv_KO_SugABC | 0.313 | -0.64 |
| H37Rv_KO_MbtN | -0.247 | -0.224 |
| Trans05 | 0.496 | 0.186 |
| macrophage_unactivated | -0.107 | -0.657 |
| IL1 | 0.38 | -0.377 |
| Rapamycin | 0.298 | 0.064 |
| Tcell | -0.456 | -0.596 |
| GMCSF | -0.066 | -0.462 |
| IFNab | -0.26 | -0.408 |
| IFNg | -0.278 | 0.366 |
| IFNg_GMCSF1 | -0.053 | 0.22 |
| Rv1432_day32 | 0.22 | -0.284 |
| Rv1565c_day32 | 0.689 | 0.463 |
| secA2_input | 0.463 | 0.033 |
| delta_Rv3594 | -0.043 | -0.742 |
| delta_Rv3717 | 0.188 | -0.302 |
| delta_Rv3811 | -0.07 | -0.897 |
| delta_Rv0954 | -0.025 | -0.265 |
| PonA1 | -0.111 | -0.918 |
| EccD1_KO | 0.691 | 0.033 |
| EspI_KO | 0.354 | 0.168 |
| PE35_KO | 0.274 | -0.029 |
| PPE68_KO | 0.397 | 0.429 |
| glycerol2 | -0.413 | -0.256 |
| lignocerate | 0.871 | 0.42 |
| oleate | -0.418 | -0.493 |
| phosphatidylcholine | 0.322 | 0.048 |
| acetate | 0.253 | 0.559 |
| glucAc | 0.51 | 0.818 |
| Rv0950ko | -0.923 | 0.136 |
| Rv1096ko | -0.299 | 1.312 |
| Rv3684ko | -0.324 | 0.668 |
| delta_otsA_trehalose | -0.705 | 0.81 |