Top 10 genes with highest correlation to Rv1852/ureG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237A/- | (cc=0.6923) | info on Rv2237A/- |
| Rv2613c/- | (cc=0.65) | info on Rv2613c/- |
| Rv2007c/fdxA | (cc=0.6385) | info on Rv2007c/fdxA |
| Rv3536c/hsaE | (cc=0.6265) | info on Rv3536c/hsaE |
| Rv1725c/- | (cc=0.6189) | info on Rv1725c/- |
| Rv2240c/- | (cc=0.6089) | info on Rv2240c/- |
| Rv0776c/- | (cc=0.6031) | info on Rv0776c/- |
| Rv1038c/esxJ | (cc=0.5859) | info on Rv1038c/esxJ |
| Rv0963c/- | (cc=0.5593) | info on Rv0963c/- |
| Rv2802c/- | (cc=0.5576) | info on Rv2802c/- |
Correlation of Rv1852/ureG with Rv3536c/hsaE
Normalized LFCs for Rv1852/ureG:
(description and provenance of datasets)
| Rv1852/ureG | Rv3536c/hsaE | |
| Fe_supp_jason_reseq | -0.595 | -0.742 |
| low_pH_jason_reseq | -1.722 | -1.415 |
| NO_jason_reseq | -0.507 | 0.194 |
| B6_jason_reseq | -2.156 | -2.137 |
| MHCII_jason_reseq | -2.675 | -1.408 |
| Isoniazid02 | 0.416 | -1.716 |
| Rifampicin4 | -0.349 | -0.306 |
| Ethambutol3 | 0.084 | -1.346 |
| Meropenem3 | 0.672 | -0.452 |
| Vancomycin16 | 0.0 | -1.313 |
| Rv2680_day32 | -2.715 | -2.328 |
| H37Rv_KO_MarP | 0.837 | 0.442 |
| hypoxia_3wks | -1.95 | -0.722 |
| hypoxia_6wks | -1.169 | -0.221 |
| glycerol | -0.844 | 0.506 |
| cholesterol | 0.341 | -2.019 |
| AJ | 0.449 | -2.664 |
| Bibs02 | -0.053 | -0.412 |
| Bibs02c | -0.497 | -1.1 |
| BL6 | 0.103 | -1.091 |
| BL6a | -1.808 | -2.323 |
| BXD01 | -1.786 | -1.088 |
| BXD010 | -2.505 | -2.563 |
| BXD011 | -0.67 | -1.064 |
| BXD03 | -0.738 | -1.284 |
| BXD04 | -1.434 | -1.649 |
| BXD05 | -0.359 | -2.149 |
| BXD06 | -1.859 | -1.989 |
| BXD07 | -1.841 | -0.746 |
| BXD08 | -0.832 | -1.527 |
| BXD09 | -1.404 | -1.795 |
| CAST | -0.108 | -1.004 |
| CCcont | -0.829 | 0.183 |
| DS01 | -1.711 | -1.889 |
| DS02 | -0.696 | -0.446 |
| DS04 | -0.637 | -0.822 |
| DS0c | 0.281 | -0.203 |
| GP01 | -1.354 | -2.45 |
| GP02 | -1.057 | -1.931 |
| GP0c | -1.728 | -1.591 |
| NOD | -1.679 | -0.871 |
| NZO | 0.451 | 0.244 |
| PWK | -0.176 | -2.561 |
| H37Rv_KO_CtpC | -1.598 | -1.787 |
| H37Rv_KO_CtpD | 0.105 | 0.117 |
| H37Rv_KO_Rv1272 | 0.293 | -0.375 |
| H37Rv_KO_SugABC | -0.825 | 0.538 |
| H37Rv_KO_MbtN | 0.029 | -1.725 |
| Trans05 | 0.727 | -0.334 |
| macrophage_unactivated | 0.581 | 0.338 |
| IL1 | -0.303 | -1.183 |
| Rapamycin | -0.313 | -0.976 |
| Tcell | -0.583 | -1.235 |
| GMCSF | -0.515 | -1.109 |
| IFNab | 1.016 | -0.729 |
| IFNg | -0.152 | -0.219 |
| IFNg_GMCSF1 | 0.842 | -0.584 |
| Rv1432_day32 | -0.18 | -0.692 |
| Rv1565c_day32 | 0.058 | -2.958 |
| secA2_input | 1.268 | -0.031 |
| delta_Rv3594 | 1.199 | -0.711 |
| delta_Rv3717 | 0.559 | -0.123 |
| delta_Rv3811 | 0.0 | -0.378 |
| delta_Rv0954 | 2.305 | 0.937 |
| PonA1 | -2.069 | -0.367 |
| EccD1_KO | -0.635 | 1.98 |
| EspI_KO | -0.319 | 0.696 |
| PE35_KO | 1.076 | 1.348 |
| PPE68_KO | -0.038 | 0.534 |
| glycerol2 | 3.213 | 2.028 |
| lignocerate | 3.973 | 2.762 |
| oleate | 0.196 | -2.069 |
| phosphatidylcholine | 3.169 | 1.548 |
| acetate | 3.498 | 1.589 |
| glucAc | 3.418 | 1.937 |
| Rv0950ko | -0.151 | -0.582 |
| Rv1096ko | 0.0 | 0.697 |
| Rv3684ko | 0.789 | 0.838 |
| delta_otsA_trehalose | 2.628 | -1.134 |