Top 10 genes with highest correlation to Rv1852/ureG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237A/- | (cc=0.6923) | info on Rv2237A/- |
| Rv2613c/- | (cc=0.65) | info on Rv2613c/- |
| Rv2007c/fdxA | (cc=0.6385) | info on Rv2007c/fdxA |
| Rv3536c/hsaE | (cc=0.6265) | info on Rv3536c/hsaE |
| Rv1725c/- | (cc=0.6189) | info on Rv1725c/- |
| Rv2240c/- | (cc=0.6089) | info on Rv2240c/- |
| Rv0776c/- | (cc=0.6031) | info on Rv0776c/- |
| Rv1038c/esxJ | (cc=0.5859) | info on Rv1038c/esxJ |
| Rv0963c/- | (cc=0.5593) | info on Rv0963c/- |
| Rv2802c/- | (cc=0.5576) | info on Rv2802c/- |
Correlation of Rv1852/ureG with Rv1725c/-
Normalized LFCs for Rv1852/ureG:
(description and provenance of datasets)
| Rv1852/ureG | Rv1725c/- | |
| Fe_supp_jason_reseq | -0.595 | -0.071 |
| low_pH_jason_reseq | -1.722 | -0.852 |
| NO_jason_reseq | -0.507 | 0.333 |
| B6_jason_reseq | -2.156 | -0.975 |
| MHCII_jason_reseq | -2.675 | 0.257 |
| Isoniazid02 | 0.416 | 0.205 |
| Rifampicin4 | -0.349 | 0.265 |
| Ethambutol3 | 0.084 | 0.255 |
| Meropenem3 | 0.672 | 0.315 |
| Vancomycin16 | 0.0 | -0.085 |
| Rv2680_day32 | -2.715 | 0.205 |
| H37Rv_KO_MarP | 0.837 | 0.598 |
| hypoxia_3wks | -1.95 | 0.0 |
| hypoxia_6wks | -1.169 | -0.136 |
| glycerol | -0.844 | 0.053 |
| cholesterol | 0.341 | -0.219 |
| AJ | 0.449 | 0.513 |
| Bibs02 | -0.053 | 0.0 |
| Bibs02c | -0.497 | -0.194 |
| BL6 | 0.103 | 0.439 |
| BL6a | -1.808 | -0.277 |
| BXD01 | -1.786 | -0.535 |
| BXD010 | -2.505 | -0.478 |
| BXD011 | -0.67 | -0.33 |
| BXD03 | -0.738 | -0.407 |
| BXD04 | -1.434 | -0.857 |
| BXD05 | -0.359 | -0.532 |
| BXD06 | -1.859 | -0.155 |
| BXD07 | -1.841 | -0.332 |
| BXD08 | -0.832 | 0.1 |
| BXD09 | -1.404 | -0.632 |
| CAST | -0.108 | 0.095 |
| CCcont | -0.829 | -0.114 |
| DS01 | -1.711 | -0.387 |
| DS02 | -0.696 | -1.068 |
| DS04 | -0.637 | 0.284 |
| DS0c | 0.281 | -0.214 |
| GP01 | -1.354 | 0.065 |
| GP02 | -1.057 | 0.381 |
| GP0c | -1.728 | -0.418 |
| NOD | -1.679 | -0.739 |
| NZO | 0.451 | 0.111 |
| PWK | -0.176 | 0.357 |
| H37Rv_KO_CtpC | -1.598 | 0.601 |
| H37Rv_KO_CtpD | 0.105 | -1.686 |
| H37Rv_KO_Rv1272 | 0.293 | 0.895 |
| H37Rv_KO_SugABC | -0.825 | 0.344 |
| H37Rv_KO_MbtN | 0.029 | 0.437 |
| Trans05 | 0.727 | -0.106 |
| macrophage_unactivated | 0.581 | 0.117 |
| IL1 | -0.303 | 0.501 |
| Rapamycin | -0.313 | 0.439 |
| Tcell | -0.583 | -0.485 |
| GMCSF | -0.515 | 0.618 |
| IFNab | 1.016 | 0.057 |
| IFNg | -0.152 | 0.267 |
| IFNg_GMCSF1 | 0.842 | 0.531 |
| Rv1432_day32 | -0.18 | -0.675 |
| Rv1565c_day32 | 0.058 | -0.128 |
| secA2_input | 1.268 | 0.152 |
| delta_Rv3594 | 1.199 | 0.467 |
| delta_Rv3717 | 0.559 | 0.535 |
| delta_Rv3811 | 0.0 | 0.552 |
| delta_Rv0954 | 2.305 | 1.013 |
| PonA1 | -2.069 | -0.111 |
| EccD1_KO | -0.635 | 0.49 |
| EspI_KO | -0.319 | 0.334 |
| PE35_KO | 1.076 | 0.0 |
| PPE68_KO | -0.038 | 0.163 |
| glycerol2 | 3.213 | 1.223 |
| lignocerate | 3.973 | 1.836 |
| oleate | 0.196 | 0.298 |
| phosphatidylcholine | 3.169 | 1.619 |
| acetate | 3.498 | 2.434 |
| glucAc | 3.418 | 2.05 |
| Rv0950ko | -0.151 | -0.235 |
| Rv1096ko | 0.0 | 0.537 |
| Rv3684ko | 0.789 | 0.612 |
| delta_otsA_trehalose | 2.628 | -1.109 |