Top 10 genes with highest correlation to Rv1852/ureG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237A/- | (cc=0.6923) | info on Rv2237A/- |
| Rv2613c/- | (cc=0.65) | info on Rv2613c/- |
| Rv2007c/fdxA | (cc=0.6385) | info on Rv2007c/fdxA |
| Rv3536c/hsaE | (cc=0.6265) | info on Rv3536c/hsaE |
| Rv1725c/- | (cc=0.6189) | info on Rv1725c/- |
| Rv2240c/- | (cc=0.6089) | info on Rv2240c/- |
| Rv0776c/- | (cc=0.6031) | info on Rv0776c/- |
| Rv1038c/esxJ | (cc=0.5859) | info on Rv1038c/esxJ |
| Rv0963c/- | (cc=0.5593) | info on Rv0963c/- |
| Rv2802c/- | (cc=0.5576) | info on Rv2802c/- |
Correlation of Rv1852/ureG with Rv2613c/-
Normalized LFCs for Rv1852/ureG:
(description and provenance of datasets)
| Rv1852/ureG | Rv2613c/- | |
| Fe_supp_jason_reseq | -0.595 | 0.268 |
| low_pH_jason_reseq | -1.722 | -1.884 |
| NO_jason_reseq | -0.507 | -2.956 |
| B6_jason_reseq | -2.156 | -1.402 |
| MHCII_jason_reseq | -2.675 | -1.234 |
| Isoniazid02 | 0.416 | -2.196 |
| Rifampicin4 | -0.349 | 0.401 |
| Ethambutol3 | 0.084 | 1.093 |
| Meropenem3 | 0.672 | -0.61 |
| Vancomycin16 | 0.0 | 0.0 |
| Rv2680_day32 | -2.715 | -2.64 |
| H37Rv_KO_MarP | 0.837 | 2.047 |
| hypoxia_3wks | -1.95 | -3.102 |
| hypoxia_6wks | -1.169 | -2.637 |
| glycerol | -0.844 | -0.136 |
| cholesterol | 0.341 | -1.687 |
| AJ | 0.449 | -2.005 |
| Bibs02 | -0.053 | -2.905 |
| Bibs02c | -0.497 | -0.455 |
| BL6 | 0.103 | -2.084 |
| BL6a | -1.808 | -0.729 |
| BXD01 | -1.786 | -2.527 |
| BXD010 | -2.505 | -2.485 |
| BXD011 | -0.67 | -1.765 |
| BXD03 | -0.738 | -2.623 |
| BXD04 | -1.434 | -2.399 |
| BXD05 | -0.359 | -2.477 |
| BXD06 | -1.859 | -2.457 |
| BXD07 | -1.841 | -2.686 |
| BXD08 | -0.832 | -2.58 |
| BXD09 | -1.404 | -2.726 |
| CAST | -0.108 | -3.337 |
| CCcont | -0.829 | -0.355 |
| DS01 | -1.711 | -3.273 |
| DS02 | -0.696 | -3.297 |
| DS04 | -0.637 | -2.572 |
| DS0c | 0.281 | 0.919 |
| GP01 | -1.354 | -1.915 |
| GP02 | -1.057 | -1.614 |
| GP0c | -1.728 | -2.522 |
| NOD | -1.679 | -1.627 |
| NZO | 0.451 | -3.024 |
| PWK | -0.176 | -2.718 |
| H37Rv_KO_CtpC | -1.598 | -1.813 |
| H37Rv_KO_CtpD | 0.105 | -2.457 |
| H37Rv_KO_Rv1272 | 0.293 | -2.736 |
| H37Rv_KO_SugABC | -0.825 | -1.015 |
| H37Rv_KO_MbtN | 0.029 | -1.803 |
| Trans05 | 0.727 | -1.397 |
| macrophage_unactivated | 0.581 | 0.537 |
| IL1 | -0.303 | -2.011 |
| Rapamycin | -0.313 | -0.592 |
| Tcell | -0.583 | -0.629 |
| GMCSF | -0.515 | -0.792 |
| IFNab | 1.016 | -1.636 |
| IFNg | -0.152 | -1.812 |
| IFNg_GMCSF1 | 0.842 | -0.943 |
| Rv1432_day32 | -0.18 | 0.0 |
| Rv1565c_day32 | 0.058 | 2.003 |
| secA2_input | 1.268 | -0.751 |
| delta_Rv3594 | 1.199 | 1.059 |
| delta_Rv3717 | 0.559 | -0.668 |
| delta_Rv3811 | 0.0 | 0.0 |
| delta_Rv0954 | 2.305 | -0.398 |
| PonA1 | -2.069 | -1.592 |
| EccD1_KO | -0.635 | 1.924 |
| EspI_KO | -0.319 | 0.419 |
| PE35_KO | 1.076 | 0.939 |
| PPE68_KO | -0.038 | 1.286 |
| glycerol2 | 3.213 | 1.684 |
| lignocerate | 3.973 | 3.801 |
| oleate | 0.196 | 0.0 |
| phosphatidylcholine | 3.169 | 2.899 |
| acetate | 3.498 | 4.337 |
| glucAc | 3.418 | 3.342 |
| Rv0950ko | -0.151 | -1.013 |
| Rv1096ko | 0.0 | 0.16 |
| Rv3684ko | 0.789 | 0.891 |
| delta_otsA_trehalose | 2.628 | -1.204 |