Top 10 genes with highest correlation to Rv1852/ureG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237A/- | (cc=0.6923) | info on Rv2237A/- |
| Rv2613c/- | (cc=0.65) | info on Rv2613c/- |
| Rv2007c/fdxA | (cc=0.6385) | info on Rv2007c/fdxA |
| Rv3536c/hsaE | (cc=0.6265) | info on Rv3536c/hsaE |
| Rv1725c/- | (cc=0.6189) | info on Rv1725c/- |
| Rv2240c/- | (cc=0.6089) | info on Rv2240c/- |
| Rv0776c/- | (cc=0.6031) | info on Rv0776c/- |
| Rv1038c/esxJ | (cc=0.5859) | info on Rv1038c/esxJ |
| Rv0963c/- | (cc=0.5593) | info on Rv0963c/- |
| Rv2802c/- | (cc=0.5576) | info on Rv2802c/- |
Correlation of Rv1852/ureG with Rv2237A/-
Normalized LFCs for Rv1852/ureG:
(description and provenance of datasets)
| Rv1852/ureG | Rv2237A/- | |
| Fe_supp_jason_reseq | -0.595 | 1.1 |
| low_pH_jason_reseq | -1.722 | -0.631 |
| NO_jason_reseq | -0.507 | -0.32 |
| B6_jason_reseq | -2.156 | -0.363 |
| MHCII_jason_reseq | -2.675 | -0.119 |
| Isoniazid02 | 0.416 | 0.362 |
| Rifampicin4 | -0.349 | 0.42 |
| Ethambutol3 | 0.084 | 0.275 |
| Meropenem3 | 0.672 | 1.324 |
| Vancomycin16 | 0.0 | -0.146 |
| Rv2680_day32 | -2.715 | -0.978 |
| H37Rv_KO_MarP | 0.837 | -0.181 |
| hypoxia_3wks | -1.95 | -0.606 |
| hypoxia_6wks | -1.169 | -2.552 |
| glycerol | -0.844 | -0.162 |
| cholesterol | 0.341 | -0.957 |
| AJ | 0.449 | -0.171 |
| Bibs02 | -0.053 | -0.011 |
| Bibs02c | -0.497 | -0.634 |
| BL6 | 0.103 | -1.255 |
| BL6a | -1.808 | -1.158 |
| BXD01 | -1.786 | -2.152 |
| BXD010 | -2.505 | -1.848 |
| BXD011 | -0.67 | -1.339 |
| BXD03 | -0.738 | -1.858 |
| BXD04 | -1.434 | -1.646 |
| BXD05 | -0.359 | -2.148 |
| BXD06 | -1.859 | -1.59 |
| BXD07 | -1.841 | -2.937 |
| BXD08 | -0.832 | -1.02 |
| BXD09 | -1.404 | -1.931 |
| CAST | -0.108 | -1.253 |
| CCcont | -0.829 | -1.09 |
| DS01 | -1.711 | 0.599 |
| DS02 | -0.696 | 0.348 |
| DS04 | -0.637 | 0.046 |
| DS0c | 0.281 | 0.55 |
| GP01 | -1.354 | -2.855 |
| GP02 | -1.057 | -2.261 |
| GP0c | -1.728 | -2.818 |
| NOD | -1.679 | -0.965 |
| NZO | 0.451 | 1.238 |
| PWK | -0.176 | -1.147 |
| H37Rv_KO_CtpC | -1.598 | 0.029 |
| H37Rv_KO_CtpD | 0.105 | 1.152 |
| H37Rv_KO_Rv1272 | 0.293 | -0.671 |
| H37Rv_KO_SugABC | -0.825 | -2.615 |
| H37Rv_KO_MbtN | 0.029 | -1.135 |
| Trans05 | 0.727 | -3.449 |
| macrophage_unactivated | 0.581 | -1.657 |
| IL1 | -0.303 | 0.347 |
| Rapamycin | -0.313 | 1.565 |
| Tcell | -0.583 | -0.081 |
| GMCSF | -0.515 | 0.758 |
| IFNab | 1.016 | -0.635 |
| IFNg | -0.152 | -0.877 |
| IFNg_GMCSF1 | 0.842 | -0.157 |
| Rv1432_day32 | -0.18 | 1.645 |
| Rv1565c_day32 | 0.058 | -0.218 |
| secA2_input | 1.268 | -0.194 |
| delta_Rv3594 | 1.199 | 0.376 |
| delta_Rv3717 | 0.559 | -1.828 |
| delta_Rv3811 | 0.0 | -0.528 |
| delta_Rv0954 | 2.305 | 0.318 |
| PonA1 | -2.069 | -1.895 |
| EccD1_KO | -0.635 | 0.148 |
| EspI_KO | -0.319 | 0.864 |
| PE35_KO | 1.076 | 0.957 |
| PPE68_KO | -0.038 | 1.241 |
| glycerol2 | 3.213 | 3.085 |
| lignocerate | 3.973 | 4.586 |
| oleate | 0.196 | 0.196 |
| phosphatidylcholine | 3.169 | 3.931 |
| acetate | 3.498 | 5.94 |
| glucAc | 3.418 | 4.505 |
| Rv0950ko | -0.151 | 0.1 |
| Rv1096ko | 0.0 | -0.504 |
| Rv3684ko | 0.789 | -1.88 |
| delta_otsA_trehalose | 2.628 | 4.101 |