Top 10 genes with highest correlation to Rv1845c/blaR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3645/- | (cc=0.5428) | info on Rv3645/- |
| Rv2207/cobT | (cc=0.5397) | info on Rv2207/cobT |
| Rv1458c/- | (cc=0.4975) | info on Rv1458c/- |
| Rv1349/irtB | (cc=0.4542) | info on Rv1349/irtB |
| Rv1081c/- | (cc=0.4414) | info on Rv1081c/- |
| Rv3446c/- | (cc=0.4167) | info on Rv3446c/- |
| Rv1692/- | (cc=0.4155) | info on Rv1692/- |
| Rv1308/atpA | (cc=0.4149) | info on Rv1308/atpA |
| Rv1534/- | (cc=0.4056) | info on Rv1534/- |
| Rv3776/- | (cc=0.4001) | info on Rv3776/- |
Correlation of Rv1845c/blaR with Rv3645/-
Normalized LFCs for Rv1845c/blaR:
(description and provenance of datasets)
| Rv1845c/blaR | Rv3645/- | |
| Fe_supp_jason_reseq | 1.796 | -1.244 |
| low_pH_jason_reseq | 6.0 | 3.53 |
| NO_jason_reseq | 0.0 | 0.194 |
| B6_jason_reseq | 0.0 | -1.028 |
| MHCII_jason_reseq | 0.0 | -0.905 |
| Isoniazid02 | 0.0 | 0.0 |
| Rifampicin4 | 0.0 | 0.0 |
| Ethambutol3 | 0.0 | 0.0 |
| Meropenem3 | 0.0 | 0.0 |
| Vancomycin16 | 0.0 | 0.0 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 0.961 | -0.178 |
| hypoxia_3wks | 0.0 | -0.55 |
| hypoxia_6wks | 0.0 | 0.727 |
| glycerol | 1.24 | 0.791 |
| cholesterol | 0.0 | 0.0 |
| AJ | 0.0 | -0.232 |
| Bibs02 | 0.0 | -0.183 |
| Bibs02c | 0.0 | -0.209 |
| BL6 | 0.0 | -0.125 |
| BL6a | 0.0 | -0.198 |
| BXD01 | 0.13 | -0.13 |
| BXD010 | 0.0 | -0.128 |
| BXD011 | 0.0 | 0.0 |
| BXD03 | 0.0 | -0.135 |
| BXD04 | 0.0 | -0.124 |
| BXD05 | 0.0 | -0.135 |
| BXD06 | 0.254 | -0.133 |
| BXD07 | 0.0 | -0.138 |
| BXD08 | 0.0 | -0.133 |
| BXD09 | 0.0 | -0.14 |
| CAST | 0.0 | -0.23 |
| CCcont | 0.285 | -0.149 |
| DS01 | 0.0 | -0.236 |
| DS02 | 0.217 | 0.199 |
| DS04 | 0.37 | -0.194 |
| DS0c | 0.0 | -0.217 |
| GP01 | 0.099 | -0.099 |
| GP02 | 0.0 | -0.083 |
| GP0c | 0.357 | -0.13 |
| NOD | 0.0 | -0.225 |
| NZO | 0.0 | -0.199 |
| PWK | 0.0 | -0.196 |
| H37Rv_KO_CtpC | 0.162 | -0.162 |
| H37Rv_KO_CtpD | 0.918 | -0.127 |
| H37Rv_KO_Rv1272 | 0.0 | -0.141 |
| H37Rv_KO_SugABC | 0.099 | -0.099 |
| H37Rv_KO_MbtN | 0.943 | -0.103 |
| Trans05 | 0.0 | -0.131 |
| macrophage_unactivated | 0.0 | 0.0 |
| IL1 | 0.0 | 0.0 |
| Rapamycin | 0.0 | 0.0 |
| Tcell | 0.0 | 0.0 |
| GMCSF | 0.0 | 0.364 |
| IFNab | 0.0 | 0.0 |
| IFNg | 0.0 | 0.369 |
| IFNg_GMCSF1 | 0.0 | 0.434 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 3.034 | 4.931 |
| delta_Rv3594 | -1.319 | -0.895 |
| delta_Rv3717 | -0.927 | -1.067 |
| delta_Rv3811 | -1.096 | -1.261 |
| delta_Rv0954 | -0.196 | -1.096 |
| PonA1 | 2.086 | -0.819 |
| EccD1_KO | 0.77 | -1.47 |
| EspI_KO | 0.667 | -1.275 |
| PE35_KO | -1.467 | -0.939 |
| PPE68_KO | -0.579 | -0.659 |
| glycerol2 | 0.0 | -0.193 |
| lignocerate | 0.0 | -0.168 |
| oleate | 0.0 | -0.196 |
| phosphatidylcholine | 0.0 | -0.193 |
| acetate | 0.0 | -0.229 |
| glucAc | 0.0 | -0.143 |
| Rv0950ko | -0.844 | 0.416 |
| Rv1096ko | -0.546 | 0.793 |
| Rv3684ko | 2.184 | 0.452 |
| delta_otsA_trehalose | -4.196 | 0.0 |