TnSeqCorr

Top 10 genes with highest correlation to Rv1837c/glcB:

update plotcorrelationlink to info on gene
Rv2842c/- (cc=0.4684) info on Rv2842c/-
Rv3264c/manB (cc=0.4086) info on Rv3264c/manB
Rv3132c/devS (cc=0.4066) info on Rv3132c/devS
Rv0545c/pitA (cc=0.385) info on Rv0545c/pitA
Rv1711/- (cc=0.3826) info on Rv1711/-
Rv3177/- (cc=0.3632) info on Rv3177/-
Rv3919c/gid (cc=0.3547) info on Rv3919c/gid
Rv2416c/eis (cc=0.3459) info on Rv2416c/eis
Rv3032/- (cc=0.3446) info on Rv3032/-
Rv0546c/- (cc=0.3428) info on Rv0546c/-

Correlation of Rv1837c/glcB with Rv3264c/manB

Normalized LFCs for Rv1837c/glcB:
(description and provenance of datasets)
Rv1837c/glcBRv3264c/manB
Fe_supp_jason_reseq

0.0

0.0

low_pH_jason_reseq

0.0

0.0

NO_jason_reseq

1.32

0.0

B6_jason_reseq

-0.292

0.0

MHCII_jason_reseq

-0.257

0.0

Isoniazid02

0.0

-0.383

Rifampicin4

0.374

-0.165

Ethambutol3

0.0

-0.32

Meropenem3

0.0

-0.595

Vancomycin16

0.0

0.0

Rv2680_day32

0.0

0.0

H37Rv_KO_MarP

0.34

-0.141

hypoxia_3wks

0.427

0.0

hypoxia_6wks

0.0

0.0

glycerol

0.992

0.0

cholesterol

0.0

0.0

AJ

0.0

0.0

Bibs02

0.0

0.0

Bibs02c

0.0

0.0

BL6

0.238

0.0

BL6a

0.377

0.0

BXD01

0.358

0.0

BXD010

0.629

0.0

BXD011

0.127

0.0

BXD03

0.135

0.0

BXD04

0.0

0.0

BXD05

0.135

0.0

BXD06

0.133

0.0

BXD07

0.138

0.0

BXD08

0.0

0.0

BXD09

0.268

0.0

CAST

0.0

0.0

CCcont

0.633

0.0

DS01

0.236

0.0

DS02

0.0

0.0

DS04

0.0

0.0

DS0c

0.0

0.0

GP01

0.0

0.099

GP02

0.0

0.0

GP0c

0.0

0.0

NOD

0.0

0.0

NZO

0.0

0.0

PWK

0.0

0.0

H37Rv_KO_CtpC

0.162

0.688

H37Rv_KO_CtpD

0.0

0.0

H37Rv_KO_Rv1272

0.0

0.0

H37Rv_KO_SugABC

0.0

0.0

H37Rv_KO_MbtN

0.572

0.103

Trans05

0.0

0.0

macrophage_unactivated

-0.436

0.0

IL1

-0.409

0.0

Rapamycin

-0.424

0.0

Tcell

0.0

0.0

GMCSF

-0.364

0.0

IFNab

0.729

0.0

IFNg

-0.369

0.0

IFNg_GMCSF1

-0.434

0.0

Rv1432_day32

-0.343

-0.583

Rv1565c_day32

0.0

0.0

secA2_input

0.18

1.111

delta_Rv3594

1.127

-0.402

delta_Rv3717

-0.331

-0.331

delta_Rv3811

0.87

0.748

delta_Rv0954

-0.163

-0.163

PonA1

-0.304

0.0

EccD1_KO

0.414

-0.73

EspI_KO

1.791

2.042

PE35_KO

0.368

0.0

PPE68_KO

0.0

-0.342

glycerol2

0.14

0.0

lignocerate

-0.13

0.0

oleate

-0.688

0.0

phosphatidylcholine

0.0

0.0

acetate

0.973

0.0

glucAc

0.605

0.0

Rv0950ko

0.38

0.0

Rv1096ko

1.348

0.38

Rv3684ko

0.413

0.789

delta_otsA_trehalose

0.0

0.0