Top 10 genes with highest correlation to Rv1789/PPE26:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1790/PPE27 | (cc=0.6094) | info on Rv1790/PPE27 |
| Rv0491/regX3 | (cc=0.5904) | info on Rv0491/regX3 |
| Rv1992c/ctpG | (cc=0.5676) | info on Rv1992c/ctpG |
| Rv2226/- | (cc=0.5243) | info on Rv2226/- |
| Rv1793/esxN | (cc=0.5229) | info on Rv1793/esxN |
| Rv3416/whiB3 | (cc=0.5207) | info on Rv3416/whiB3 |
| Rv1846c/blaI | (cc=0.5205) | info on Rv1846c/blaI |
| Rv0325/- | (cc=0.5198) | info on Rv0325/- |
| Rv2387/- | (cc=0.5191) | info on Rv2387/- |
| Rv1940/ribA1 | (cc=0.5116) | info on Rv1940/ribA1 |
Correlation of Rv1789/PPE26 with Rv0325/-
Normalized LFCs for Rv1789/PPE26:
(description and provenance of datasets)
| Rv1789/PPE26 | Rv0325/- | |
| Fe_supp_jason_reseq | -0.273 | -0.933 |
| low_pH_jason_reseq | -0.801 | -0.1 |
| NO_jason_reseq | 0.047 | 0.459 |
| B6_jason_reseq | -0.401 | 0.812 |
| MHCII_jason_reseq | -1.782 | 0.663 |
| Isoniazid02 | 0.543 | 2.146 |
| Rifampicin4 | 0.934 | 0.0 |
| Ethambutol3 | 1.22 | 1.867 |
| Meropenem3 | 0.892 | 0.734 |
| Vancomycin16 | 0.541 | 0.196 |
| Rv2680_day32 | -0.315 | 0.179 |
| H37Rv_KO_MarP | 0.144 | 0.226 |
| hypoxia_3wks | 0.343 | 0.742 |
| hypoxia_6wks | -0.035 | 0.286 |
| glycerol | 0.012 | 0.048 |
| cholesterol | -1.269 | 0.406 |
| AJ | 0.103 | -0.04 |
| Bibs02 | 0.187 | 0.155 |
| Bibs02c | -0.564 | -0.755 |
| BL6 | -1.279 | -1.539 |
| BL6a | -0.895 | -0.966 |
| BXD01 | -0.872 | -0.567 |
| BXD010 | -1.686 | -1.32 |
| BXD011 | -1.202 | -0.328 |
| BXD03 | -1.467 | -1.245 |
| BXD04 | -0.99 | -1.3 |
| BXD05 | -0.837 | -1.341 |
| BXD06 | -1.492 | -0.854 |
| BXD07 | -1.075 | -1.477 |
| BXD08 | -0.423 | -0.473 |
| BXD09 | -1.142 | -1.507 |
| CAST | -0.364 | 0.138 |
| CCcont | -0.593 | -1.472 |
| DS01 | -0.335 | -0.151 |
| DS02 | -0.469 | -0.997 |
| DS04 | 0.153 | -0.471 |
| DS0c | -0.506 | 0.273 |
| GP01 | -0.584 | -1.378 |
| GP02 | 0.91 | -0.636 |
| GP0c | -0.131 | -0.421 |
| NOD | -0.696 | -0.099 |
| NZO | 0.168 | 0.156 |
| PWK | -0.057 | -0.004 |
| H37Rv_KO_CtpC | -0.379 | -0.961 |
| H37Rv_KO_CtpD | -1.325 | -0.729 |
| H37Rv_KO_Rv1272 | -0.28 | -1.118 |
| H37Rv_KO_SugABC | -0.679 | -0.529 |
| H37Rv_KO_MbtN | 0.499 | -0.872 |
| Trans05 | -0.045 | -0.003 |
| macrophage_unactivated | 0.079 | -0.735 |
| IL1 | 0.074 | -0.32 |
| Rapamycin | 0.19 | -0.694 |
| Tcell | 0.283 | 0.209 |
| GMCSF | 0.99 | 0.298 |
| IFNab | -0.157 | -0.263 |
| IFNg | 1.002 | -0.069 |
| IFNg_GMCSF1 | 1.772 | 0.16 |
| Rv1432_day32 | 0.169 | -0.11 |
| Rv1565c_day32 | -0.57 | 0.306 |
| secA2_input | 0.711 | -0.47 |
| delta_Rv3594 | -0.046 | -0.236 |
| delta_Rv3717 | -0.115 | 0.121 |
| delta_Rv3811 | 0.0 | 0.126 |
| delta_Rv0954 | 0.399 | 1.239 |
| PonA1 | -0.006 | 0.807 |
| EccD1_KO | 0.22 | -0.25 |
| EspI_KO | 0.168 | 0.117 |
| PE35_KO | -0.163 | -0.263 |
| PPE68_KO | -0.48 | -0.729 |
| glycerol2 | 0.276 | 0.678 |
| lignocerate | 0.045 | 0.183 |
| oleate | 0.651 | 0.872 |
| phosphatidylcholine | 0.388 | 0.657 |
| acetate | -0.08 | -0.374 |
| glucAc | 0.204 | -0.387 |
| Rv0950ko | 0.087 | 0.467 |
| Rv1096ko | -0.395 | -0.341 |
| Rv3684ko | -0.675 | -1.1 |
| delta_otsA_trehalose | 0.381 | -0.601 |