Top 10 genes with highest correlation to Rv1734c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3607c/folB | (cc=0.7228) | info on Rv3607c/folB |
| Rv1160/mutT2 | (cc=0.6591) | info on Rv1160/mutT2 |
| Rv0850/- | (cc=0.6571) | info on Rv0850/- |
| Rv0737/- | (cc=0.6506) | info on Rv0737/- |
| Rv0089/- | (cc=0.6374) | info on Rv0089/- |
| Rv0984/moaB2 | (cc=0.6371) | info on Rv0984/moaB2 |
| Rv2669/- | (cc=0.6349) | info on Rv2669/- |
| Rv2841c/nusA | (cc=0.6273) | info on Rv2841c/nusA |
| Rv0741/- | (cc=0.6217) | info on Rv0741/- |
| Rv0540/- | (cc=0.6055) | info on Rv0540/- |
Correlation of Rv1734c/- with Rv1160/mutT2
Normalized LFCs for Rv1734c/-:
(description and provenance of datasets)
| Rv1734c/- | Rv1160/mutT2 | |
| Fe_supp_jason_reseq | -0.758 | 0.796 |
| low_pH_jason_reseq | -1.522 | 1.783 |
| NO_jason_reseq | 0.189 | -1.362 |
| B6_jason_reseq | 0.334 | 3.11 |
| MHCII_jason_reseq | 0.931 | 1.161 |
| Isoniazid02 | 0.07 | 0.732 |
| Rifampicin4 | -0.972 | 0.634 |
| Ethambutol3 | -0.362 | -0.505 |
| Meropenem3 | -0.186 | 0.266 |
| Vancomycin16 | -0.791 | 0.34 |
| Rv2680_day32 | 0.413 | 2.399 |
| H37Rv_KO_MarP | -0.143 | 0.459 |
| hypoxia_3wks | 0.052 | -1.475 |
| hypoxia_6wks | 0.629 | -1.428 |
| glycerol | -1.717 | 1.011 |
| cholesterol | -0.385 | -0.301 |
| AJ | -0.637 | -0.143 |
| Bibs02 | 0.18 | 2.236 |
| Bibs02c | -0.115 | 2.039 |
| BL6 | -5.025 | -1.115 |
| BL6a | -1.475 | 0.329 |
| BXD01 | -1.484 | -0.795 |
| BXD010 | -1.162 | -2.719 |
| BXD011 | -1.613 | -1.161 |
| BXD03 | -2.441 | 1.517 |
| BXD04 | -3.083 | -0.961 |
| BXD05 | -3.861 | -1.403 |
| BXD06 | -2.192 | -1.163 |
| BXD07 | -2.899 | -2.94 |
| BXD08 | -3.815 | -1.95 |
| BXD09 | -2.746 | -2.584 |
| CAST | -0.148 | 0.799 |
| CCcont | -3.255 | -1.108 |
| DS01 | 0.659 | 0.157 |
| DS02 | 0.408 | -0.362 |
| DS04 | 0.481 | -0.343 |
| DS0c | 0.424 | 0.328 |
| GP01 | -0.855 | 0.435 |
| GP02 | -1.086 | -0.447 |
| GP0c | -2.222 | 0.271 |
| NOD | -0.272 | 1.32 |
| NZO | -0.8 | 0.345 |
| PWK | 0.074 | 1.447 |
| H37Rv_KO_CtpC | -1.159 | -1.121 |
| H37Rv_KO_CtpD | -4.643 | 0.124 |
| H37Rv_KO_Rv1272 | -0.903 | -2.821 |
| H37Rv_KO_SugABC | 0.39 | 0.972 |
| H37Rv_KO_MbtN | -0.286 | -1.948 |
| Trans05 | -0.229 | -2.469 |
| macrophage_unactivated | -4.564 | -4.135 |
| IL1 | -6.0 | -2.325 |
| Rapamycin | -5.291 | -6.0 |
| Tcell | -2.727 | -4.871 |
| GMCSF | -4.668 | -5.405 |
| IFNab | -4.831 | -5.393 |
| IFNg | -6.0 | -4.559 |
| IFNg_GMCSF1 | -2.485 | -3.94 |
| Rv1432_day32 | 0.421 | -0.156 |
| Rv1565c_day32 | -0.199 | 0.829 |
| secA2_input | -5.268 | -1.257 |
| delta_Rv3594 | 2.268 | 3.218 |
| delta_Rv3717 | 1.881 | 1.803 |
| delta_Rv3811 | 2.17 | 2.947 |
| delta_Rv0954 | 1.354 | 3.865 |
| PonA1 | 2.964 | 2.68 |
| EccD1_KO | -0.664 | -2.052 |
| EspI_KO | -2.98 | -2.436 |
| PE35_KO | -1.19 | -1.24 |
| PPE68_KO | -1.699 | -1.776 |
| glycerol2 | -0.336 | 3.041 |
| lignocerate | -0.566 | 3.54 |
| oleate | 0.34 | 0.373 |
| phosphatidylcholine | -0.227 | 2.749 |
| acetate | -0.01 | 4.0 |
| glucAc | -1.467 | 3.778 |
| Rv0950ko | 0.519 | -0.908 |
| Rv1096ko | 0.642 | -0.063 |
| Rv3684ko | -0.115 | 1.985 |
| delta_otsA_trehalose | 0.443 | -0.438 |