Top 10 genes with highest correlation to Rv1731/gabD2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1070c/echA8 | (cc=0.7318) | info on Rv1070c/echA8 |
| Rv3395c/- | (cc=0.6483) | info on Rv3395c/- |
| Rv2474c/- | (cc=0.6371) | info on Rv2474c/- |
| Rv1181/pks4 | (cc=0.6338) | info on Rv1181/pks4 |
| Rv3136A/- | (cc=0.6317) | info on Rv3136A/- |
| Rv3354/- | (cc=0.6304) | info on Rv3354/- |
| Rv1323/fadA4 | (cc=0.6254) | info on Rv1323/fadA4 |
| Rv2633c/- | (cc=0.6249) | info on Rv2633c/- |
| Rv2028c/- | (cc=0.6128) | info on Rv2028c/- |
| Rv2708c/- | (cc=0.6028) | info on Rv2708c/- |
Correlation of Rv1731/gabD2 with Rv3354/-
Normalized LFCs for Rv1731/gabD2:
(description and provenance of datasets)
| Rv1731/gabD2 | Rv3354/- | |
| Fe_supp_jason_reseq | 1.414 | -1.138 |
| low_pH_jason_reseq | -0.234 | -0.381 |
| NO_jason_reseq | -0.496 | -0.793 |
| B6_jason_reseq | 0.968 | 0.985 |
| MHCII_jason_reseq | 0.922 | 1.019 |
| Isoniazid02 | 2.222 | 1.043 |
| Rifampicin4 | 0.612 | 0.125 |
| Ethambutol3 | 1.846 | 0.398 |
| Meropenem3 | 0.787 | 1.179 |
| Vancomycin16 | 0.485 | 0.162 |
| Rv2680_day32 | -0.77 | 0.659 |
| H37Rv_KO_MarP | 0.976 | 0.422 |
| hypoxia_3wks | -0.311 | -0.347 |
| hypoxia_6wks | -0.762 | -0.595 |
| glycerol | 0.143 | 0.674 |
| cholesterol | 0.103 | 0.892 |
| AJ | -0.844 | -0.171 |
| Bibs02 | -0.906 | -0.029 |
| Bibs02c | -0.126 | 0.596 |
| BL6 | -0.135 | -0.912 |
| BL6a | -0.679 | -0.067 |
| BXD01 | -0.878 | -1.687 |
| BXD010 | -0.388 | -1.434 |
| BXD011 | -0.631 | -2.812 |
| BXD03 | -1.159 | -2.487 |
| BXD04 | -0.293 | -1.729 |
| BXD05 | -0.531 | -1.146 |
| BXD06 | -0.527 | -1.932 |
| BXD07 | -0.787 | -2.262 |
| BXD08 | -0.512 | -1.667 |
| BXD09 | -0.89 | -2.542 |
| CAST | -0.609 | 0.097 |
| CCcont | -0.868 | -1.82 |
| DS01 | -0.313 | -0.077 |
| DS02 | -0.098 | 0.269 |
| DS04 | -0.257 | 0.395 |
| DS0c | -0.456 | -0.597 |
| GP01 | -0.752 | -1.486 |
| GP02 | -1.025 | -0.295 |
| GP0c | -1.226 | -0.754 |
| NOD | -0.392 | -0.169 |
| NZO | -0.247 | 0.127 |
| PWK | 0.098 | 0.367 |
| H37Rv_KO_CtpC | -1.118 | -0.788 |
| H37Rv_KO_CtpD | -1.473 | -1.146 |
| H37Rv_KO_Rv1272 | -0.469 | -0.927 |
| H37Rv_KO_SugABC | 0.11 | -0.855 |
| H37Rv_KO_MbtN | -0.511 | -1.624 |
| Trans05 | -1.015 | -0.244 |
| macrophage_unactivated | -1.117 | -1.654 |
| IL1 | -1.272 | -1.649 |
| Rapamycin | -0.365 | -1.034 |
| Tcell | -1.153 | -1.473 |
| GMCSF | -0.481 | -2.118 |
| IFNab | -1.182 | -2.056 |
| IFNg | -0.195 | -0.949 |
| IFNg_GMCSF1 | -1.471 | -0.641 |
| Rv1432_day32 | -0.086 | 0.3 |
| Rv1565c_day32 | 0.305 | 0.635 |
| secA2_input | -0.916 | 0.645 |
| delta_Rv3594 | -0.028 | -0.395 |
| delta_Rv3717 | -0.068 | -0.21 |
| delta_Rv3811 | 0.315 | 0.592 |
| delta_Rv0954 | 1.269 | 0.58 |
| PonA1 | 0.173 | -0.802 |
| EccD1_KO | 0.355 | 1.217 |
| EspI_KO | -0.108 | 1.201 |
| PE35_KO | 0.703 | 0.204 |
| PPE68_KO | 0.771 | 1.254 |
| glycerol2 | 0.398 | 1.595 |
| lignocerate | 1.058 | 1.672 |
| oleate | -0.679 | 0.822 |
| phosphatidylcholine | 0.73 | 1.291 |
| acetate | 0.938 | 1.047 |
| glucAc | 0.898 | 1.449 |
| Rv0950ko | 0.332 | 0.365 |
| Rv1096ko | 1.062 | 0.268 |
| Rv3684ko | 0.694 | 0.933 |
| delta_otsA_trehalose | 0.492 | 0.808 |