Top 10 genes with highest correlation to Rv1731/gabD2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1070c/echA8 | (cc=0.7318) | info on Rv1070c/echA8 |
| Rv3395c/- | (cc=0.6483) | info on Rv3395c/- |
| Rv2474c/- | (cc=0.6371) | info on Rv2474c/- |
| Rv1181/pks4 | (cc=0.6338) | info on Rv1181/pks4 |
| Rv3136A/- | (cc=0.6317) | info on Rv3136A/- |
| Rv3354/- | (cc=0.6304) | info on Rv3354/- |
| Rv1323/fadA4 | (cc=0.6254) | info on Rv1323/fadA4 |
| Rv2633c/- | (cc=0.6249) | info on Rv2633c/- |
| Rv2028c/- | (cc=0.6128) | info on Rv2028c/- |
| Rv2708c/- | (cc=0.6028) | info on Rv2708c/- |
Correlation of Rv1731/gabD2 with Rv1070c/echA8
Normalized LFCs for Rv1731/gabD2:
(description and provenance of datasets)
| Rv1731/gabD2 | Rv1070c/echA8 | |
| Fe_supp_jason_reseq | 1.414 | 0.044 |
| low_pH_jason_reseq | -0.234 | -1.447 |
| NO_jason_reseq | -0.496 | -2.363 |
| B6_jason_reseq | 0.968 | -0.763 |
| MHCII_jason_reseq | 0.922 | -0.657 |
| Isoniazid02 | 2.222 | 0.955 |
| Rifampicin4 | 0.612 | 1.156 |
| Ethambutol3 | 1.846 | 5.307 |
| Meropenem3 | 0.787 | 0.067 |
| Vancomycin16 | 0.485 | 1.772 |
| Rv2680_day32 | -0.77 | -1.231 |
| H37Rv_KO_MarP | 0.976 | -0.203 |
| hypoxia_3wks | -0.311 | -3.856 |
| hypoxia_6wks | -0.762 | -3.061 |
| glycerol | 0.143 | -0.493 |
| cholesterol | 0.103 | 0.361 |
| AJ | -0.844 | -0.598 |
| Bibs02 | -0.906 | 0.107 |
| Bibs02c | -0.126 | -0.982 |
| BL6 | -0.135 | -1.623 |
| BL6a | -0.679 | -2.381 |
| BXD01 | -0.878 | -3.234 |
| BXD010 | -0.388 | -2.02 |
| BXD011 | -0.631 | -3.162 |
| BXD03 | -1.159 | -2.674 |
| BXD04 | -0.293 | -1.65 |
| BXD05 | -0.531 | -2.155 |
| BXD06 | -0.527 | -2.347 |
| BXD07 | -0.787 | -2.454 |
| BXD08 | -0.512 | -1.678 |
| BXD09 | -0.89 | -2.661 |
| CAST | -0.609 | -1.416 |
| CCcont | -0.868 | -1.565 |
| DS01 | -0.313 | -0.241 |
| DS02 | -0.098 | 0.425 |
| DS04 | -0.257 | 0.18 |
| DS0c | -0.456 | -0.438 |
| GP01 | -0.752 | -2.249 |
| GP02 | -1.025 | -2.219 |
| GP0c | -1.226 | -1.975 |
| NOD | -0.392 | -1.811 |
| NZO | -0.247 | -1.913 |
| PWK | 0.098 | -0.986 |
| H37Rv_KO_CtpC | -1.118 | -1.22 |
| H37Rv_KO_CtpD | -1.473 | -2.977 |
| H37Rv_KO_Rv1272 | -0.469 | -2.365 |
| H37Rv_KO_SugABC | 0.11 | -1.687 |
| H37Rv_KO_MbtN | -0.511 | -2.192 |
| Trans05 | -1.015 | -1.637 |
| macrophage_unactivated | -1.117 | -2.898 |
| IL1 | -1.272 | -4.034 |
| Rapamycin | -0.365 | -1.706 |
| Tcell | -1.153 | -3.483 |
| GMCSF | -0.481 | -1.991 |
| IFNab | -1.182 | -2.279 |
| IFNg | -0.195 | -4.191 |
| IFNg_GMCSF1 | -1.471 | -3.249 |
| Rv1432_day32 | -0.086 | -0.404 |
| Rv1565c_day32 | 0.305 | -1.316 |
| secA2_input | -0.916 | -0.712 |
| delta_Rv3594 | -0.028 | 0.315 |
| delta_Rv3717 | -0.068 | -0.795 |
| delta_Rv3811 | 0.315 | -0.913 |
| delta_Rv0954 | 1.269 | -0.19 |
| PonA1 | 0.173 | 0.446 |
| EccD1_KO | 0.355 | 1.25 |
| EspI_KO | -0.108 | 1.192 |
| PE35_KO | 0.703 | 0.858 |
| PPE68_KO | 0.771 | 1.069 |
| glycerol2 | 0.398 | 0.761 |
| lignocerate | 1.058 | 0.994 |
| oleate | -0.679 | 0.737 |
| phosphatidylcholine | 0.73 | 0.57 |
| acetate | 0.938 | 0.603 |
| glucAc | 0.898 | 1.012 |
| Rv0950ko | 0.332 | 0.543 |
| Rv1096ko | 1.062 | 1.113 |
| Rv3684ko | 0.694 | 0.177 |
| delta_otsA_trehalose | 0.492 | -0.229 |