Top 10 genes with highest correlation to Rv1726/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3077/- | (cc=0.5916) | info on Rv3077/- |
| Rv3742c/- | (cc=0.5788) | info on Rv3742c/- |
| Rv0342/iniA | (cc=0.5451) | info on Rv0342/iniA |
| Rv2313c/- | (cc=0.5379) | info on Rv2313c/- |
| Rv3664c/dppC | (cc=0.5365) | info on Rv3664c/dppC |
| Rv1413/- | (cc=0.5321) | info on Rv1413/- |
| Rv0968/- | (cc=0.5265) | info on Rv0968/- |
| Rv3329/- | (cc=0.525) | info on Rv3329/- |
| Rv2679/echA15 | (cc=0.5212) | info on Rv2679/echA15 |
| Rv0399c/lpqK | (cc=0.5157) | info on Rv0399c/lpqK |
Correlation of Rv1726/- with Rv3329/-
Normalized LFCs for Rv1726/-:
(description and provenance of datasets)
| Rv1726/- | Rv3329/- | |
| Fe_supp_jason_reseq | -0.541 | 0.0 |
| low_pH_jason_reseq | -0.502 | 0.33 |
| NO_jason_reseq | 0.727 | 0.257 |
| B6_jason_reseq | 0.182 | 0.714 |
| MHCII_jason_reseq | 0.394 | 0.049 |
| Isoniazid02 | -2.193 | -2.423 |
| Rifampicin4 | -0.623 | 0.598 |
| Ethambutol3 | -1.188 | -1.639 |
| Meropenem3 | -2.035 | -2.211 |
| Vancomycin16 | -0.942 | -0.947 |
| Rv2680_day32 | -0.623 | -0.046 |
| H37Rv_KO_MarP | -0.144 | -0.354 |
| hypoxia_3wks | 0.343 | 0.323 |
| hypoxia_6wks | 0.198 | 0.418 |
| glycerol | -0.032 | 0.294 |
| cholesterol | -0.173 | 0.128 |
| AJ | 0.82 | 0.576 |
| Bibs02 | 0.009 | 0.114 |
| Bibs02c | 0.142 | -0.471 |
| BL6 | 0.437 | -0.095 |
| BL6a | -0.065 | -0.357 |
| BXD01 | -0.306 | 0.024 |
| BXD010 | -0.362 | -0.183 |
| BXD011 | -0.674 | -0.136 |
| BXD03 | -0.154 | 0.412 |
| BXD04 | 0.506 | -0.07 |
| BXD05 | -0.316 | 0.47 |
| BXD06 | 0.049 | -0.013 |
| BXD07 | -0.493 | 0.197 |
| BXD08 | -0.089 | 0.321 |
| BXD09 | -0.283 | -0.079 |
| CAST | -0.494 | 0.28 |
| CCcont | -0.928 | -0.159 |
| DS01 | 0.577 | 0.137 |
| DS02 | 0.843 | 0.444 |
| DS04 | 1.304 | 0.035 |
| DS0c | 0.0 | 0.079 |
| GP01 | 0.433 | 0.022 |
| GP02 | 0.396 | -0.011 |
| GP0c | -0.462 | -0.716 |
| NOD | -0.604 | -0.063 |
| NZO | -0.11 | 0.656 |
| PWK | -0.344 | 0.459 |
| H37Rv_KO_CtpC | -0.175 | -0.471 |
| H37Rv_KO_CtpD | 0.862 | -0.278 |
| H37Rv_KO_Rv1272 | 0.0 | -0.856 |
| H37Rv_KO_SugABC | 1.181 | -0.375 |
| H37Rv_KO_MbtN | -0.13 | -0.939 |
| Trans05 | 0.379 | -0.265 |
| macrophage_unactivated | 0.243 | -0.281 |
| IL1 | 0.285 | 0.098 |
| Rapamycin | 0.568 | 0.199 |
| Tcell | 0.342 | -0.042 |
| GMCSF | 0.227 | 0.069 |
| IFNab | 0.26 | -0.375 |
| IFNg | 0.401 | 0.088 |
| IFNg_GMCSF1 | 0.899 | 0.041 |
| Rv1432_day32 | 0.567 | -0.288 |
| Rv1565c_day32 | 0.676 | 0.627 |
| secA2_input | 0.147 | 0.343 |
| delta_Rv3594 | -0.303 | -0.314 |
| delta_Rv3717 | -0.18 | -0.258 |
| delta_Rv3811 | 0.126 | -0.421 |
| delta_Rv0954 | 0.121 | 0.094 |
| PonA1 | 0.14 | 0.264 |
| EccD1_KO | -0.237 | -0.428 |
| EspI_KO | -0.077 | 0.1 |
| PE35_KO | -0.578 | -0.7 |
| PPE68_KO | -0.381 | -0.115 |
| glycerol2 | -0.147 | 0.113 |
| lignocerate | -0.057 | 0.244 |
| oleate | -0.22 | 0.658 |
| phosphatidylcholine | 0.063 | 0.314 |
| acetate | -0.362 | -0.07 |
| glucAc | -0.503 | -0.458 |
| Rv0950ko | 0.247 | 0.054 |
| Rv1096ko | 1.188 | 0.262 |
| Rv3684ko | 0.583 | -0.118 |
| delta_otsA_trehalose | 2.62 | 0.232 |