Top 10 genes with highest correlation to Rv1726/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3077/- | (cc=0.5916) | info on Rv3077/- |
| Rv3742c/- | (cc=0.5788) | info on Rv3742c/- |
| Rv0342/iniA | (cc=0.5451) | info on Rv0342/iniA |
| Rv2313c/- | (cc=0.5379) | info on Rv2313c/- |
| Rv3664c/dppC | (cc=0.5365) | info on Rv3664c/dppC |
| Rv1413/- | (cc=0.5321) | info on Rv1413/- |
| Rv0968/- | (cc=0.5265) | info on Rv0968/- |
| Rv3329/- | (cc=0.525) | info on Rv3329/- |
| Rv2679/echA15 | (cc=0.5212) | info on Rv2679/echA15 |
| Rv0399c/lpqK | (cc=0.5157) | info on Rv0399c/lpqK |
Correlation of Rv1726/- with Rv2679/echA15
Normalized LFCs for Rv1726/-:
(description and provenance of datasets)
| Rv1726/- | Rv2679/echA15 | |
| Fe_supp_jason_reseq | -0.541 | -0.857 |
| low_pH_jason_reseq | -0.502 | -1.198 |
| NO_jason_reseq | 0.727 | 1.142 |
| B6_jason_reseq | 0.182 | -0.225 |
| MHCII_jason_reseq | 0.394 | 0.652 |
| Isoniazid02 | -2.193 | -2.239 |
| Rifampicin4 | -0.623 | 0.214 |
| Ethambutol3 | -1.188 | -1.268 |
| Meropenem3 | -2.035 | -1.438 |
| Vancomycin16 | -0.942 | -0.873 |
| Rv2680_day32 | -0.623 | 0.16 |
| H37Rv_KO_MarP | -0.144 | 0.085 |
| hypoxia_3wks | 0.343 | -0.319 |
| hypoxia_6wks | 0.198 | -0.66 |
| glycerol | -0.032 | 0.48 |
| cholesterol | -0.173 | 0.102 |
| AJ | 0.82 | 0.388 |
| Bibs02 | 0.009 | -0.71 |
| Bibs02c | 0.142 | 0.1 |
| BL6 | 0.437 | 0.269 |
| BL6a | -0.065 | -0.696 |
| BXD01 | -0.306 | 0.183 |
| BXD010 | -0.362 | -0.586 |
| BXD011 | -0.674 | 0.013 |
| BXD03 | -0.154 | -0.669 |
| BXD04 | 0.506 | -0.318 |
| BXD05 | -0.316 | -0.124 |
| BXD06 | 0.049 | -0.331 |
| BXD07 | -0.493 | 0.032 |
| BXD08 | -0.089 | 0.514 |
| BXD09 | -0.283 | -0.61 |
| CAST | -0.494 | -0.445 |
| CCcont | -0.928 | 0.019 |
| DS01 | 0.577 | -0.12 |
| DS02 | 0.843 | -0.347 |
| DS04 | 1.304 | 0.201 |
| DS0c | 0.0 | -0.925 |
| GP01 | 0.433 | 0.265 |
| GP02 | 0.396 | 1.004 |
| GP0c | -0.462 | 0.0 |
| NOD | -0.604 | 0.41 |
| NZO | -0.11 | 0.202 |
| PWK | -0.344 | 0.32 |
| H37Rv_KO_CtpC | -0.175 | 0.118 |
| H37Rv_KO_CtpD | 0.862 | 1.037 |
| H37Rv_KO_Rv1272 | 0.0 | -0.179 |
| H37Rv_KO_SugABC | 1.181 | -0.594 |
| H37Rv_KO_MbtN | -0.13 | 0.237 |
| Trans05 | 0.379 | -0.359 |
| macrophage_unactivated | 0.243 | -0.994 |
| IL1 | 0.285 | 0.329 |
| Rapamycin | 0.568 | 0.377 |
| Tcell | 0.342 | -0.267 |
| GMCSF | 0.227 | 0.692 |
| IFNab | 0.26 | 0.054 |
| IFNg | 0.401 | -0.168 |
| IFNg_GMCSF1 | 0.899 | 0.258 |
| Rv1432_day32 | 0.567 | 0.096 |
| Rv1565c_day32 | 0.676 | -0.321 |
| secA2_input | 0.147 | 0.603 |
| delta_Rv3594 | -0.303 | -0.387 |
| delta_Rv3717 | -0.18 | 0.248 |
| delta_Rv3811 | 0.126 | -1.472 |
| delta_Rv0954 | 0.121 | -0.076 |
| PonA1 | 0.14 | -0.062 |
| EccD1_KO | -0.237 | -0.454 |
| EspI_KO | -0.077 | 0.157 |
| PE35_KO | -0.578 | -0.362 |
| PPE68_KO | -0.381 | 0.118 |
| glycerol2 | -0.147 | 0.387 |
| lignocerate | -0.057 | 0.716 |
| oleate | -0.22 | 0.795 |
| phosphatidylcholine | 0.063 | 0.794 |
| acetate | -0.362 | 0.073 |
| glucAc | -0.503 | 0.036 |
| Rv0950ko | 0.247 | 0.627 |
| Rv1096ko | 1.188 | 0.609 |
| Rv3684ko | 0.583 | 0.544 |
| delta_otsA_trehalose | 2.62 | 1.186 |