Top 10 genes with highest correlation to Rv1726/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3077/- | (cc=0.5916) | info on Rv3077/- |
| Rv3742c/- | (cc=0.5788) | info on Rv3742c/- |
| Rv0342/iniA | (cc=0.5451) | info on Rv0342/iniA |
| Rv2313c/- | (cc=0.5379) | info on Rv2313c/- |
| Rv3664c/dppC | (cc=0.5365) | info on Rv3664c/dppC |
| Rv1413/- | (cc=0.5321) | info on Rv1413/- |
| Rv0968/- | (cc=0.5265) | info on Rv0968/- |
| Rv3329/- | (cc=0.525) | info on Rv3329/- |
| Rv2679/echA15 | (cc=0.5212) | info on Rv2679/echA15 |
| Rv0399c/lpqK | (cc=0.5157) | info on Rv0399c/lpqK |
Correlation of Rv1726/- with Rv0968/-
Normalized LFCs for Rv1726/-:
(description and provenance of datasets)
| Rv1726/- | Rv0968/- | |
| Fe_supp_jason_reseq | -0.541 | 0.704 |
| low_pH_jason_reseq | -0.502 | -0.738 |
| NO_jason_reseq | 0.727 | 0.423 |
| B6_jason_reseq | 0.182 | 0.01 |
| MHCII_jason_reseq | 0.394 | 0.27 |
| Isoniazid02 | -2.193 | -3.296 |
| Rifampicin4 | -0.623 | 0.831 |
| Ethambutol3 | -1.188 | -2.914 |
| Meropenem3 | -2.035 | -3.018 |
| Vancomycin16 | -0.942 | -1.112 |
| Rv2680_day32 | -0.623 | 0.91 |
| H37Rv_KO_MarP | -0.144 | 0.883 |
| hypoxia_3wks | 0.343 | -0.203 |
| hypoxia_6wks | 0.198 | -1.349 |
| glycerol | -0.032 | 0.677 |
| cholesterol | -0.173 | 0.845 |
| AJ | 0.82 | 0.528 |
| Bibs02 | 0.009 | -0.278 |
| Bibs02c | 0.142 | 0.671 |
| BL6 | 0.437 | -0.789 |
| BL6a | -0.065 | -0.393 |
| BXD01 | -0.306 | -0.379 |
| BXD010 | -0.362 | -0.019 |
| BXD011 | -0.674 | -0.923 |
| BXD03 | -0.154 | -0.794 |
| BXD04 | 0.506 | -0.426 |
| BXD05 | -0.316 | 0.48 |
| BXD06 | 0.049 | -0.954 |
| BXD07 | -0.493 | -0.699 |
| BXD08 | -0.089 | -0.379 |
| BXD09 | -0.283 | -0.542 |
| CAST | -0.494 | 0.265 |
| CCcont | -0.928 | -0.929 |
| DS01 | 0.577 | -0.469 |
| DS02 | 0.843 | 0.635 |
| DS04 | 1.304 | 0.093 |
| DS0c | 0.0 | -0.211 |
| GP01 | 0.433 | 0.345 |
| GP02 | 0.396 | -0.744 |
| GP0c | -0.462 | -0.329 |
| NOD | -0.604 | 0.885 |
| NZO | -0.11 | -0.27 |
| PWK | -0.344 | -0.254 |
| H37Rv_KO_CtpC | -0.175 | -0.14 |
| H37Rv_KO_CtpD | 0.862 | 1.622 |
| H37Rv_KO_Rv1272 | 0.0 | 1.062 |
| H37Rv_KO_SugABC | 1.181 | 0.86 |
| H37Rv_KO_MbtN | -0.13 | -1.047 |
| Trans05 | 0.379 | -0.921 |
| macrophage_unactivated | 0.243 | -0.843 |
| IL1 | 0.285 | -0.946 |
| Rapamycin | 0.568 | -1.105 |
| Tcell | 0.342 | -0.472 |
| GMCSF | 0.227 | -0.055 |
| IFNab | 0.26 | -0.13 |
| IFNg | 0.401 | -0.516 |
| IFNg_GMCSF1 | 0.899 | -0.569 |
| Rv1432_day32 | 0.567 | -0.215 |
| Rv1565c_day32 | 0.676 | 0.445 |
| secA2_input | 0.147 | 1.842 |
| delta_Rv3594 | -0.303 | 0.096 |
| delta_Rv3717 | -0.18 | -0.593 |
| delta_Rv3811 | 0.126 | -0.167 |
| delta_Rv0954 | 0.121 | -0.105 |
| PonA1 | 0.14 | 1.324 |
| EccD1_KO | -0.237 | 1.237 |
| EspI_KO | -0.077 | -0.074 |
| PE35_KO | -0.578 | 0.111 |
| PPE68_KO | -0.381 | -0.192 |
| glycerol2 | -0.147 | 0.146 |
| lignocerate | -0.057 | 0.072 |
| oleate | -0.22 | 0.18 |
| phosphatidylcholine | 0.063 | 0.326 |
| acetate | -0.362 | 0.352 |
| glucAc | -0.503 | 0.061 |
| Rv0950ko | 0.247 | 0.458 |
| Rv1096ko | 1.188 | 1.2 |
| Rv3684ko | 0.583 | 0.652 |
| delta_otsA_trehalose | 2.62 | 1.843 |