TnSeqCorr

Top 10 genes with highest correlation to Rv1715/fadB3:

update plotcorrelationlink to info on gene
Rv1681/moeX (cc=0.4538) info on Rv1681/moeX
Rv1078/pra (cc=0.4386) info on Rv1078/pra
Rv2785c/rpsO (cc=0.4229) info on Rv2785c/rpsO
Rv0092/ctpA (cc=0.4172) info on Rv0092/ctpA
Rv0671/lpqP (cc=0.4077) info on Rv0671/lpqP
Rv1457c/- (cc=0.3976) info on Rv1457c/-
Rv2202c/adoK (cc=0.3849) info on Rv2202c/adoK
Rv3073c/- (cc=0.3827) info on Rv3073c/-
Rv1458c/- (cc=0.3827) info on Rv1458c/-
Rv3043c/ctaD (cc=0.3676) info on Rv3043c/ctaD

Correlation of Rv1715/fadB3 with Rv1681/moeX

Normalized LFCs for Rv1715/fadB3:
(description and provenance of datasets)
Rv1715/fadB3Rv1681/moeX
Fe_supp_jason_reseq

0.655

0.458

low_pH_jason_reseq

0.842

0.979

NO_jason_reseq

-0.108

-0.331

B6_jason_reseq

0.994

0.427

MHCII_jason_reseq

-0.406

-0.095

Isoniazid02

0.141

-0.031

Rifampicin4

0.0

-0.233

Ethambutol3

3.89

2.811

Meropenem3

0.604

-0.225

Vancomycin16

0.257

-0.027

Rv2680_day32

-0.131

-0.775

H37Rv_KO_MarP

0.0

-0.734

hypoxia_3wks

-0.439

-0.171

hypoxia_6wks

0.347

0.257

glycerol

0.233

0.108

cholesterol

-0.401

-0.044

AJ

-1.856

-0.689

Bibs02

-0.138

-0.037

Bibs02c

2.402

0.264

BL6

-1.782

-0.347

BL6a

1.362

-0.164

BXD01

-0.28

-0.361

BXD010

-0.574

-0.442

BXD011

-0.776

-0.422

BXD03

-1.397

-0.307

BXD04

0.168

-0.496

BXD05

-0.708

-0.241

BXD06

-0.412

-0.713

BXD07

-0.257

-0.421

BXD08

-0.81

-0.849

BXD09

0.191

-0.446

CAST

0.41

-0.37

CCcont

-0.785

-0.873

DS01

1.095

0.32

DS02

-0.468

0.043

DS04

-2.135

-0.642

DS0c

0.431

0.236

GP01

1.317

-1.292

GP02

-0.204

-1.421

GP0c

0.926

-0.955

NOD

-0.29

-0.21

NZO

-2.494

-0.607

PWK

-1.032

0.132

H37Rv_KO_CtpC

-0.854

-1.294

H37Rv_KO_CtpD

1.231

0.529

H37Rv_KO_Rv1272

-0.742

-0.32

H37Rv_KO_SugABC

-0.184

0.619

H37Rv_KO_MbtN

1.183

-1.443

Trans05

-0.168

-0.645

macrophage_unactivated

-0.328

-0.937

IL1

0.288

-0.341

Rapamycin

0.927

-0.172

Tcell

0.417

-0.375

GMCSF

0.65

-0.214

IFNab

-1.288

-0.955

IFNg

-0.906

-0.978

IFNg_GMCSF1

0.402

-0.28

Rv1432_day32

-0.391

-1.027

Rv1565c_day32

-1.779

-0.878

secA2_input

2.203

-0.045

delta_Rv3594

0.13

-0.876

delta_Rv3717

0.107

-0.171

delta_Rv3811

0.358

-0.384

delta_Rv0954

-0.375

0.893

PonA1

-0.274

0.684

EccD1_KO

-1.322

0.293

EspI_KO

-0.596

-0.411

PE35_KO

-1.327

-0.385

PPE68_KO

-1.811

-0.304

glycerol2

-1.058

-1.938

lignocerate

-0.865

-1.831

oleate

-0.665

-1.884

phosphatidylcholine

-0.606

-1.507

acetate

-0.547

-2.529

glucAc

-1.409

-2.108

Rv0950ko

-1.022

-0.745

Rv1096ko

-1.565

-0.247

Rv3684ko

-2.561

-0.724

delta_otsA_trehalose

-0.465

0.336