Top 10 genes with highest correlation to Rv1705c/PPE22:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1992c/ctpG | (cc=0.5366) | info on Rv1992c/ctpG |
| Rv0865/mog | (cc=0.5119) | info on Rv0865/mog |
| Rv2629/- | (cc=0.505) | info on Rv2629/- |
| Rv1233c/- | (cc=0.4996) | info on Rv1233c/- |
| Rv2226/- | (cc=0.4987) | info on Rv2226/- |
| Rv2784c/lppU | (cc=0.4638) | info on Rv2784c/lppU |
| Rv1280c/oppA | (cc=0.4549) | info on Rv1280c/oppA |
| Rv2725c/hflX | (cc=0.4525) | info on Rv2725c/hflX |
| Rv1878/glnA3 | (cc=0.4443) | info on Rv1878/glnA3 |
| Rv2089c/pepE | (cc=0.4435) | info on Rv2089c/pepE |
Correlation of Rv1705c/PPE22 with Rv2784c/lppU
Normalized LFCs for Rv1705c/PPE22:
(description and provenance of datasets)
| Rv1705c/PPE22 | Rv2784c/lppU | |
| Fe_supp_jason_reseq | -0.568 | 1.512 |
| low_pH_jason_reseq | -1.029 | -0.428 |
| NO_jason_reseq | 0.068 | -0.709 |
| B6_jason_reseq | -0.727 | -0.669 |
| MHCII_jason_reseq | -0.418 | 0.497 |
| Isoniazid02 | 1.358 | 0.84 |
| Rifampicin4 | 0.127 | -1.356 |
| Ethambutol3 | 0.745 | 1.155 |
| Meropenem3 | 1.846 | 0.582 |
| Vancomycin16 | 0.244 | 0.186 |
| Rv2680_day32 | 0.152 | -0.617 |
| H37Rv_KO_MarP | 0.377 | 2.004 |
| hypoxia_3wks | 0.0 | 0.375 |
| hypoxia_6wks | -0.217 | -1.105 |
| glycerol | 0.076 | 0.259 |
| cholesterol | 0.143 | 0.256 |
| AJ | 0.145 | -0.008 |
| Bibs02 | -0.134 | 0.286 |
| Bibs02c | 0.558 | 0.218 |
| BL6 | -0.2 | -1.188 |
| BL6a | 0.23 | -0.192 |
| BXD01 | -0.478 | -0.88 |
| BXD010 | -0.326 | -1.691 |
| BXD011 | -0.345 | -1.875 |
| BXD03 | -0.137 | -1.786 |
| BXD04 | 0.33 | -0.9 |
| BXD05 | -0.127 | -2.264 |
| BXD06 | -0.553 | -2.059 |
| BXD07 | -0.307 | -1.326 |
| BXD08 | -0.043 | -1.004 |
| BXD09 | -0.153 | -1.159 |
| CAST | -0.137 | -1.308 |
| CCcont | -0.38 | -0.195 |
| DS01 | -0.24 | 0.814 |
| DS02 | 0.536 | 0.438 |
| DS04 | 1.072 | 1.552 |
| DS0c | 0.289 | 0.695 |
| GP01 | -0.318 | -0.996 |
| GP02 | -0.939 | 0.519 |
| GP0c | -0.408 | -1.203 |
| NOD | 0.412 | 0.073 |
| NZO | -0.052 | -0.053 |
| PWK | -0.3 | -0.783 |
| H37Rv_KO_CtpC | 0.131 | -0.579 |
| H37Rv_KO_CtpD | 0.868 | -0.896 |
| H37Rv_KO_Rv1272 | 0.235 | -0.4 |
| H37Rv_KO_SugABC | 0.931 | -0.191 |
| H37Rv_KO_MbtN | 0.155 | -0.828 |
| Trans05 | -0.929 | -2.359 |
| macrophage_unactivated | 0.193 | 0.612 |
| IL1 | 0.113 | -0.234 |
| Rapamycin | -0.074 | 0.654 |
| Tcell | 0.437 | -0.218 |
| GMCSF | 0.729 | -0.428 |
| IFNab | 0.094 | -0.998 |
| IFNg | 0.043 | -0.211 |
| IFNg_GMCSF1 | -0.101 | -1.395 |
| Rv1432_day32 | 0.082 | -1.241 |
| Rv1565c_day32 | 0.262 | 0.25 |
| secA2_input | 0.081 | 1.176 |
| delta_Rv3594 | 0.32 | 0.411 |
| delta_Rv3717 | 0.028 | -1.026 |
| delta_Rv3811 | 0.583 | 0.589 |
| delta_Rv0954 | 0.451 | 0.504 |
| PonA1 | 1.012 | 2.124 |
| EccD1_KO | 0.122 | 0.187 |
| EspI_KO | 0.131 | 0.502 |
| PE35_KO | 0.464 | 1.003 |
| PPE68_KO | 0.586 | 0.291 |
| glycerol2 | -0.073 | 0.217 |
| lignocerate | 0.212 | 0.564 |
| oleate | 0.196 | 0.489 |
| phosphatidylcholine | 0.332 | 1.31 |
| acetate | -0.472 | -0.643 |
| glucAc | -0.122 | -0.852 |
| Rv0950ko | 0.404 | -0.947 |
| Rv1096ko | -0.332 | -0.694 |
| Rv3684ko | -0.029 | -1.32 |
| delta_otsA_trehalose | 0.0 | -0.019 |