Top 10 genes with highest correlation to Rv1670/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2066/cobI | (cc=0.5156) | info on Rv2066/cobI |
| Rv2489c/- | (cc=0.4689) | info on Rv2489c/- |
| Rv3451/cut3 | (cc=0.4423) | info on Rv3451/cut3 |
| Rv0073/- | (cc=0.4289) | info on Rv0073/- |
| Rv1997/ctpF | (cc=0.3953) | info on Rv1997/ctpF |
| Rv1677/dsbF | (cc=0.3927) | info on Rv1677/dsbF |
| Rv1148c/- | (cc=0.3915) | info on Rv1148c/- |
| Rv1511/gmdA | (cc=0.3858) | info on Rv1511/gmdA |
| Rv1916/aceAb | (cc=0.3858) | info on Rv1916/aceAb |
| Rv1427c/fadD12 | (cc=0.3851) | info on Rv1427c/fadD12 |
Correlation of Rv1670/- with Rv1997/ctpF
Normalized LFCs for Rv1670/-:
(description and provenance of datasets)
| Rv1670/- | Rv1997/ctpF | |
| Fe_supp_jason_reseq | 0.159 | -0.878 |
| low_pH_jason_reseq | 0.853 | -0.186 |
| NO_jason_reseq | -0.336 | -0.095 |
| B6_jason_reseq | -0.578 | 0.162 |
| MHCII_jason_reseq | -0.336 | 0.632 |
| Isoniazid02 | -1.702 | -2.354 |
| Rifampicin4 | -0.366 | 0.523 |
| Ethambutol3 | -0.933 | -1.859 |
| Meropenem3 | -1.155 | -1.853 |
| Vancomycin16 | -0.576 | -0.881 |
| Rv2680_day32 | 1.862 | -0.306 |
| H37Rv_KO_MarP | 0.041 | -0.102 |
| hypoxia_3wks | 0.411 | 0.152 |
| hypoxia_6wks | 0.626 | 0.209 |
| glycerol | -0.295 | 0.041 |
| cholesterol | 0.577 | -0.328 |
| AJ | 0.234 | -0.129 |
| Bibs02 | 0.984 | 0.629 |
| Bibs02c | 0.811 | 0.494 |
| BL6 | -1.179 | -0.134 |
| BL6a | -0.451 | -0.257 |
| BXD01 | 0.009 | -0.242 |
| BXD010 | -1.115 | -0.367 |
| BXD011 | -0.615 | -0.791 |
| BXD03 | 0.286 | -0.824 |
| BXD04 | -1.143 | -1.454 |
| BXD05 | 0.216 | -0.82 |
| BXD06 | -1.258 | -1.041 |
| BXD07 | -0.603 | -1.1 |
| BXD08 | 0.734 | -0.81 |
| BXD09 | -1.018 | -0.908 |
| CAST | 0.4 | 0.322 |
| CCcont | -0.72 | -0.77 |
| DS01 | 0.486 | 0.258 |
| DS02 | 1.583 | 0.238 |
| DS04 | 0.447 | 0.212 |
| DS0c | 1.436 | 0.404 |
| GP01 | 1.015 | -0.554 |
| GP02 | 0.636 | 0.022 |
| GP0c | -0.551 | -0.149 |
| NOD | 0.317 | 0.542 |
| NZO | 0.03 | -0.37 |
| PWK | 0.946 | -0.301 |
| H37Rv_KO_CtpC | -0.4 | 0.033 |
| H37Rv_KO_CtpD | 1.254 | 0.313 |
| H37Rv_KO_Rv1272 | -0.403 | 0.254 |
| H37Rv_KO_SugABC | -0.216 | 0.718 |
| H37Rv_KO_MbtN | -1.361 | -0.242 |
| Trans05 | 0.4 | 0.391 |
| macrophage_unactivated | -0.234 | -0.303 |
| IL1 | 2.554 | -0.486 |
| Rapamycin | -0.227 | -0.095 |
| Tcell | -0.583 | -0.313 |
| GMCSF | -0.694 | 0.04 |
| IFNab | 0.073 | -0.444 |
| IFNg | -0.131 | -0.58 |
| IFNg_GMCSF1 | -0.647 | -0.198 |
| Rv1432_day32 | -0.575 | 0.021 |
| Rv1565c_day32 | -1.366 | -0.235 |
| secA2_input | 0.316 | 0.834 |
| delta_Rv3594 | 0.337 | -0.154 |
| delta_Rv3717 | 0.053 | -0.235 |
| delta_Rv3811 | -0.116 | -0.329 |
| delta_Rv0954 | 0.497 | -0.376 |
| PonA1 | 0.0 | -1.025 |
| EccD1_KO | 0.743 | 0.352 |
| EspI_KO | 0.285 | 0.04 |
| PE35_KO | 0.636 | 0.35 |
| PPE68_KO | -0.093 | 0.218 |
| glycerol2 | -0.135 | 0.223 |
| lignocerate | -0.634 | -0.029 |
| oleate | 0.237 | 0.457 |
| phosphatidylcholine | -0.34 | 0.283 |
| acetate | -0.477 | -0.062 |
| glucAc | -1.143 | 0.085 |
| Rv0950ko | 0.392 | -0.359 |
| Rv1096ko | -0.911 | -0.6 |
| Rv3684ko | -0.354 | 0.138 |
| delta_otsA_trehalose | 0.817 | 0.064 |