Top 10 genes with highest correlation to Rv1670/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2066/cobI | (cc=0.5156) | info on Rv2066/cobI |
| Rv2489c/- | (cc=0.4689) | info on Rv2489c/- |
| Rv3451/cut3 | (cc=0.4423) | info on Rv3451/cut3 |
| Rv0073/- | (cc=0.4289) | info on Rv0073/- |
| Rv1997/ctpF | (cc=0.3953) | info on Rv1997/ctpF |
| Rv1677/dsbF | (cc=0.3927) | info on Rv1677/dsbF |
| Rv1148c/- | (cc=0.3915) | info on Rv1148c/- |
| Rv1511/gmdA | (cc=0.3858) | info on Rv1511/gmdA |
| Rv1916/aceAb | (cc=0.3858) | info on Rv1916/aceAb |
| Rv1427c/fadD12 | (cc=0.3851) | info on Rv1427c/fadD12 |
Correlation of Rv1670/- with Rv1916/aceAb
Normalized LFCs for Rv1670/-:
(description and provenance of datasets)
| Rv1670/- | Rv1916/aceAb | |
| Fe_supp_jason_reseq | 0.159 | -0.188 |
| low_pH_jason_reseq | 0.853 | -0.532 |
| NO_jason_reseq | -0.336 | 0.0 |
| B6_jason_reseq | -0.578 | 0.676 |
| MHCII_jason_reseq | -0.336 | 0.767 |
| Isoniazid02 | -1.702 | -1.4 |
| Rifampicin4 | -0.366 | 0.468 |
| Ethambutol3 | -0.933 | -1.89 |
| Meropenem3 | -1.155 | -1.194 |
| Vancomycin16 | -0.576 | -0.873 |
| Rv2680_day32 | 1.862 | -0.093 |
| H37Rv_KO_MarP | 0.041 | -0.478 |
| hypoxia_3wks | 0.411 | -0.367 |
| hypoxia_6wks | 0.626 | 0.474 |
| glycerol | -0.295 | -0.622 |
| cholesterol | 0.577 | -0.116 |
| AJ | 0.234 | -0.203 |
| Bibs02 | 0.984 | -0.381 |
| Bibs02c | 0.811 | 0.314 |
| BL6 | -1.179 | -1.125 |
| BL6a | -0.451 | -0.056 |
| BXD01 | 0.009 | -0.389 |
| BXD010 | -1.115 | -1.383 |
| BXD011 | -0.615 | -0.266 |
| BXD03 | 0.286 | -0.088 |
| BXD04 | -1.143 | -0.887 |
| BXD05 | 0.216 | -0.575 |
| BXD06 | -1.258 | -0.424 |
| BXD07 | -0.603 | -0.375 |
| BXD08 | 0.734 | -0.473 |
| BXD09 | -1.018 | -0.913 |
| CAST | 0.4 | 0.11 |
| CCcont | -0.72 | -1.499 |
| DS01 | 0.486 | 0.383 |
| DS02 | 1.583 | 0.26 |
| DS04 | 0.447 | -0.055 |
| DS0c | 1.436 | 0.442 |
| GP01 | 1.015 | -0.555 |
| GP02 | 0.636 | 0.411 |
| GP0c | -0.551 | -0.583 |
| NOD | 0.317 | 0.0 |
| NZO | 0.03 | 0.175 |
| PWK | 0.946 | 0.443 |
| H37Rv_KO_CtpC | -0.4 | -0.425 |
| H37Rv_KO_CtpD | 1.254 | 0.9 |
| H37Rv_KO_Rv1272 | -0.403 | 0.54 |
| H37Rv_KO_SugABC | -0.216 | 0.041 |
| H37Rv_KO_MbtN | -1.361 | 0.38 |
| Trans05 | 0.4 | 0.172 |
| macrophage_unactivated | -0.234 | -0.524 |
| IL1 | 2.554 | -0.839 |
| Rapamycin | -0.227 | -1.559 |
| Tcell | -0.583 | -0.44 |
| GMCSF | -0.694 | 0.75 |
| IFNab | 0.073 | -1.07 |
| IFNg | -0.131 | -0.444 |
| IFNg_GMCSF1 | -0.647 | 0.088 |
| Rv1432_day32 | -0.575 | -0.171 |
| Rv1565c_day32 | -1.366 | -0.123 |
| secA2_input | 0.316 | 0.279 |
| delta_Rv3594 | 0.337 | 0.057 |
| delta_Rv3717 | 0.053 | -0.491 |
| delta_Rv3811 | -0.116 | 0.491 |
| delta_Rv0954 | 0.497 | -0.14 |
| PonA1 | 0.0 | -0.366 |
| EccD1_KO | 0.743 | 0.122 |
| EspI_KO | 0.285 | 0.625 |
| PE35_KO | 0.636 | 1.482 |
| PPE68_KO | -0.093 | 1.187 |
| glycerol2 | -0.135 | 0.248 |
| lignocerate | -0.634 | -0.304 |
| oleate | 0.237 | 0.861 |
| phosphatidylcholine | -0.34 | 0.5 |
| acetate | -0.477 | -0.608 |
| glucAc | -1.143 | -0.965 |
| Rv0950ko | 0.392 | -0.479 |
| Rv1096ko | -0.911 | -1.556 |
| Rv3684ko | -0.354 | -1.032 |
| delta_otsA_trehalose | 0.817 | 1.49 |