Top 10 genes with highest correlation to Rv1666c/cyp139:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2226/- | (cc=0.4691) | info on Rv2226/- |
| Rv0865/mog | (cc=0.4493) | info on Rv0865/mog |
| Rv2811/- | (cc=0.4307) | info on Rv2811/- |
| Rv2293c/- | (cc=0.4176) | info on Rv2293c/- |
| Rv0174/mce1F | (cc=0.4144) | info on Rv0174/mce1F |
| Rv1102c/mazF3 | (cc=0.4112) | info on Rv1102c/mazF3 |
| Rv1523/- | (cc=0.401) | info on Rv1523/- |
| Rv1705c/PPE22 | (cc=0.3995) | info on Rv1705c/PPE22 |
| Rv1739c/- | (cc=0.3994) | info on Rv1739c/- |
| Rv2955c/- | (cc=0.396) | info on Rv2955c/- |
Correlation of Rv1666c/cyp139 with Rv2955c/-
Normalized LFCs for Rv1666c/cyp139:
(description and provenance of datasets)
| Rv1666c/cyp139 | Rv2955c/- | |
| Fe_supp_jason_reseq | -0.745 | -0.931 |
| low_pH_jason_reseq | -0.502 | 0.649 |
| NO_jason_reseq | -0.488 | -0.026 |
| B6_jason_reseq | 0.34 | -0.206 |
| MHCII_jason_reseq | -0.473 | 0.575 |
| Isoniazid02 | -0.163 | 0.185 |
| Rifampicin4 | -0.06 | 0.644 |
| Ethambutol3 | -0.179 | 0.66 |
| Meropenem3 | 0.576 | 2.825 |
| Vancomycin16 | -0.058 | 0.162 |
| Rv2680_day32 | -0.114 | -0.117 |
| H37Rv_KO_MarP | 0.223 | -0.063 |
| hypoxia_3wks | 0.327 | 0.251 |
| hypoxia_6wks | 0.578 | 0.0 |
| glycerol | 0.676 | 0.87 |
| cholesterol | 0.061 | 0.101 |
| AJ | -0.267 | 0.511 |
| Bibs02 | -0.236 | 0.576 |
| Bibs02c | -0.768 | -0.189 |
| BL6 | -0.12 | -0.258 |
| BL6a | -0.517 | -0.118 |
| BXD01 | 0.07 | 0.396 |
| BXD010 | -0.661 | 0.326 |
| BXD011 | -0.447 | -0.417 |
| BXD03 | 0.248 | -0.08 |
| BXD04 | -0.093 | 0.509 |
| BXD05 | -0.11 | 0.256 |
| BXD06 | -0.297 | -0.059 |
| BXD07 | -0.034 | -0.071 |
| BXD08 | 0.251 | 0.541 |
| BXD09 | -0.378 | -0.01 |
| CAST | -0.329 | -0.102 |
| CCcont | -0.698 | -0.183 |
| DS01 | -0.272 | -0.233 |
| DS02 | -0.403 | 0.454 |
| DS04 | -0.024 | 0.096 |
| DS0c | -0.5 | 0.181 |
| GP01 | -0.155 | -0.893 |
| GP02 | -1.579 | 0.041 |
| GP0c | -0.535 | -0.118 |
| NOD | 0.208 | 0.033 |
| NZO | -0.025 | 0.802 |
| PWK | -0.24 | 0.466 |
| H37Rv_KO_CtpC | -0.349 | 0.091 |
| H37Rv_KO_CtpD | 0.277 | 0.218 |
| H37Rv_KO_Rv1272 | -0.659 | -1.094 |
| H37Rv_KO_SugABC | 0.907 | 0.441 |
| H37Rv_KO_MbtN | 0.536 | 0.547 |
| Trans05 | 0.136 | 0.473 |
| macrophage_unactivated | -0.477 | -0.877 |
| IL1 | -0.81 | 0.107 |
| Rapamycin | -0.629 | -0.169 |
| Tcell | -0.189 | -0.661 |
| GMCSF | 0.246 | -0.048 |
| IFNab | -0.206 | -0.52 |
| IFNg | 0.174 | -0.072 |
| IFNg_GMCSF1 | -0.214 | 0.057 |
| Rv1432_day32 | -0.316 | 0.9 |
| Rv1565c_day32 | -0.346 | -1.208 |
| secA2_input | 0.21 | -0.099 |
| delta_Rv3594 | 0.309 | -0.288 |
| delta_Rv3717 | -0.034 | -0.677 |
| delta_Rv3811 | 0.18 | -0.464 |
| delta_Rv0954 | -0.109 | 0.111 |
| PonA1 | 0.477 | -0.466 |
| EccD1_KO | 0.28 | 0.194 |
| EspI_KO | 0.334 | 1.027 |
| PE35_KO | 0.639 | 0.968 |
| PPE68_KO | 0.771 | 0.937 |
| glycerol2 | 0.121 | -0.722 |
| lignocerate | -0.202 | -0.887 |
| oleate | 0.723 | -0.305 |
| phosphatidylcholine | 0.268 | -0.612 |
| acetate | -0.783 | -1.006 |
| glucAc | -0.965 | -0.933 |
| Rv0950ko | -0.145 | -0.823 |
| Rv1096ko | -0.042 | -0.283 |
| Rv3684ko | -1.359 | -1.307 |
| delta_otsA_trehalose | -0.827 | -0.081 |