Top 10 genes with highest correlation to Rv1666c/cyp139:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2226/- | (cc=0.4691) | info on Rv2226/- |
| Rv0865/mog | (cc=0.4493) | info on Rv0865/mog |
| Rv2811/- | (cc=0.4307) | info on Rv2811/- |
| Rv2293c/- | (cc=0.4176) | info on Rv2293c/- |
| Rv0174/mce1F | (cc=0.4144) | info on Rv0174/mce1F |
| Rv1102c/mazF3 | (cc=0.4112) | info on Rv1102c/mazF3 |
| Rv1523/- | (cc=0.401) | info on Rv1523/- |
| Rv1705c/PPE22 | (cc=0.3995) | info on Rv1705c/PPE22 |
| Rv1739c/- | (cc=0.3994) | info on Rv1739c/- |
| Rv2955c/- | (cc=0.396) | info on Rv2955c/- |
Correlation of Rv1666c/cyp139 with Rv2811/-
Normalized LFCs for Rv1666c/cyp139:
(description and provenance of datasets)
| Rv1666c/cyp139 | Rv2811/- | |
| Fe_supp_jason_reseq | -0.745 | -0.027 |
| low_pH_jason_reseq | -0.502 | -3.097 |
| NO_jason_reseq | -0.488 | -2.959 |
| B6_jason_reseq | 0.34 | 0.577 |
| MHCII_jason_reseq | -0.473 | -0.261 |
| Isoniazid02 | -0.163 | 0.403 |
| Rifampicin4 | -0.06 | 0.991 |
| Ethambutol3 | -0.179 | 0.161 |
| Meropenem3 | 0.576 | 1.502 |
| Vancomycin16 | -0.058 | 0.072 |
| Rv2680_day32 | -0.114 | -3.829 |
| H37Rv_KO_MarP | 0.223 | -0.119 |
| hypoxia_3wks | 0.327 | 0.443 |
| hypoxia_6wks | 0.578 | -0.583 |
| glycerol | 0.676 | 2.24 |
| cholesterol | 0.061 | 0.015 |
| AJ | -0.267 | -1.321 |
| Bibs02 | -0.236 | 1.454 |
| Bibs02c | -0.768 | -1.651 |
| BL6 | -0.12 | -3.01 |
| BL6a | -0.517 | -1.092 |
| BXD01 | 0.07 | 0.066 |
| BXD010 | -0.661 | -2.371 |
| BXD011 | -0.447 | -1.793 |
| BXD03 | 0.248 | -0.722 |
| BXD04 | -0.093 | 0.135 |
| BXD05 | -0.11 | -0.628 |
| BXD06 | -0.297 | -0.365 |
| BXD07 | -0.034 | -0.669 |
| BXD08 | 0.251 | -0.437 |
| BXD09 | -0.378 | -0.483 |
| CAST | -0.329 | -1.528 |
| CCcont | -0.698 | -3.444 |
| DS01 | -0.272 | 1.28 |
| DS02 | -0.403 | 0.046 |
| DS04 | -0.024 | 1.435 |
| DS0c | -0.5 | 0.068 |
| GP01 | -0.155 | -2.376 |
| GP02 | -1.579 | -1.774 |
| GP0c | -0.535 | -2.057 |
| NOD | 0.208 | -0.613 |
| NZO | -0.025 | -0.152 |
| PWK | -0.24 | -0.239 |
| H37Rv_KO_CtpC | -0.349 | -0.731 |
| H37Rv_KO_CtpD | 0.277 | -2.199 |
| H37Rv_KO_Rv1272 | -0.659 | -0.777 |
| H37Rv_KO_SugABC | 0.907 | -1.477 |
| H37Rv_KO_MbtN | 0.536 | 0.131 |
| Trans05 | 0.136 | 0.154 |
| macrophage_unactivated | -0.477 | -0.439 |
| IL1 | -0.81 | -1.964 |
| Rapamycin | -0.629 | -1.025 |
| Tcell | -0.189 | -0.336 |
| GMCSF | 0.246 | 2.223 |
| IFNab | -0.206 | 0.608 |
| IFNg | 0.174 | -0.275 |
| IFNg_GMCSF1 | -0.214 | -0.324 |
| Rv1432_day32 | -0.316 | 0.18 |
| Rv1565c_day32 | -0.346 | 0.0 |
| secA2_input | 0.21 | 2.403 |
| delta_Rv3594 | 0.309 | -1.762 |
| delta_Rv3717 | -0.034 | 0.867 |
| delta_Rv3811 | 0.18 | 0.369 |
| delta_Rv0954 | -0.109 | 1.96 |
| PonA1 | 0.477 | 0.808 |
| EccD1_KO | 0.28 | 0.875 |
| EspI_KO | 0.334 | 2.681 |
| PE35_KO | 0.639 | 1.006 |
| PPE68_KO | 0.771 | 0.902 |
| glycerol2 | 0.121 | -0.928 |
| lignocerate | -0.202 | -1.777 |
| oleate | 0.723 | 0.028 |
| phosphatidylcholine | 0.268 | -0.885 |
| acetate | -0.783 | -2.065 |
| glucAc | -0.965 | -4.609 |
| Rv0950ko | -0.145 | 1.11 |
| Rv1096ko | -0.042 | 1.27 |
| Rv3684ko | -1.359 | 0.436 |
| delta_otsA_trehalose | -0.827 | -0.101 |