Top 10 genes with highest correlation to Rv1663/pks17:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1962A/vapB35 | (cc=0.5226) | info on Rv1962A/vapB35 |
| Rv1259/udgB | (cc=0.4952) | info on Rv1259/udgB |
| Rv2938/drrC | (cc=0.4896) | info on Rv2938/drrC |
| Rv2937/drrB | (cc=0.4811) | info on Rv2937/drrB |
| Rv1054/- | (cc=0.4787) | info on Rv1054/- |
| Rv1785c/cyp143 | (cc=0.4689) | info on Rv1785c/cyp143 |
| Rv3157/nuoM | (cc=0.4573) | info on Rv3157/nuoM |
| Rv2683/- | (cc=0.4534) | info on Rv2683/- |
| Rv2451/- | (cc=0.4513) | info on Rv2451/- |
| Rv2936/drrA | (cc=0.446) | info on Rv2936/drrA |
Correlation of Rv1663/pks17 with Rv1054/-
Normalized LFCs for Rv1663/pks17:
(description and provenance of datasets)
| Rv1663/pks17 | Rv1054/- | |
| Fe_supp_jason_reseq | -0.281 | -1.787 |
| low_pH_jason_reseq | 1.472 | 0.564 |
| NO_jason_reseq | -0.659 | 0.36 |
| B6_jason_reseq | -1.086 | -0.332 |
| MHCII_jason_reseq | -1.323 | 0.317 |
| Isoniazid02 | 1.906 | 0.0 |
| Rifampicin4 | 0.154 | 0.606 |
| Ethambutol3 | 1.565 | -0.043 |
| Meropenem3 | 3.735 | 2.658 |
| Vancomycin16 | 0.432 | 0.432 |
| Rv2680_day32 | 1.025 | 0.511 |
| H37Rv_KO_MarP | -0.957 | -0.341 |
| hypoxia_3wks | 1.097 | -0.327 |
| hypoxia_6wks | 0.614 | -0.86 |
| glycerol | 1.219 | 0.357 |
| cholesterol | 0.26 | 0.205 |
| AJ | -0.698 | -0.234 |
| Bibs02 | -1.722 | 0.168 |
| Bibs02c | 0.746 | -0.309 |
| BL6 | 1.423 | 0.292 |
| BL6a | 0.706 | 0.231 |
| BXD01 | 1.377 | 1.337 |
| BXD010 | 1.085 | 1.139 |
| BXD011 | 1.098 | 0.999 |
| BXD03 | 1.413 | 1.234 |
| BXD04 | 1.217 | 0.97 |
| BXD05 | 1.341 | 1.03 |
| BXD06 | 0.537 | 1.18 |
| BXD07 | 1.396 | 1.84 |
| BXD08 | 1.047 | 0.476 |
| BXD09 | 1.171 | 1.6 |
| CAST | -0.501 | -0.34 |
| CCcont | 1.869 | 0.444 |
| DS01 | 1.15 | 1.001 |
| DS02 | 1.875 | 0.531 |
| DS04 | 0.78 | 1.691 |
| DS0c | -0.146 | -0.536 |
| GP01 | -0.033 | -1.031 |
| GP02 | -0.326 | -0.9 |
| GP0c | 1.84 | 0.136 |
| NOD | -0.989 | -0.478 |
| NZO | -0.98 | -1.391 |
| PWK | -0.769 | 0.08 |
| H37Rv_KO_CtpC | 1.469 | -0.24 |
| H37Rv_KO_CtpD | 2.322 | -1.275 |
| H37Rv_KO_Rv1272 | 0.715 | 0.698 |
| H37Rv_KO_SugABC | -0.784 | 1.566 |
| H37Rv_KO_MbtN | -0.224 | -0.691 |
| Trans05 | 0.689 | 0.104 |
| macrophage_unactivated | 0.196 | -0.644 |
| IL1 | -0.756 | -1.75 |
| Rapamycin | -0.939 | -1.381 |
| Tcell | -0.068 | 2.154 |
| GMCSF | -0.808 | -0.692 |
| IFNab | -0.333 | -2.092 |
| IFNg | 0.056 | -1.221 |
| IFNg_GMCSF1 | -1.873 | -1.628 |
| Rv1432_day32 | -0.266 | -0.387 |
| Rv1565c_day32 | 0.035 | 1.106 |
| secA2_input | -1.237 | -1.199 |
| delta_Rv3594 | -0.269 | -1.4 |
| delta_Rv3717 | -0.907 | -1.343 |
| delta_Rv3811 | -0.7 | -1.728 |
| delta_Rv0954 | 0.704 | -0.072 |
| PonA1 | 0.054 | 0.351 |
| EccD1_KO | 0.687 | 1.973 |
| EspI_KO | 1.318 | 0.374 |
| PE35_KO | 1.28 | -0.884 |
| PPE68_KO | 1.552 | -1.613 |
| glycerol2 | 0.185 | -0.958 |
| lignocerate | 0.414 | -0.581 |
| oleate | 0.187 | 0.699 |
| phosphatidylcholine | 0.354 | -0.221 |
| acetate | 0.05 | -0.58 |
| glucAc | 0.0 | -1.394 |
| Rv0950ko | 0.066 | -1.149 |
| Rv1096ko | 0.555 | -0.464 |
| Rv3684ko | 0.0 | -0.557 |
| delta_otsA_trehalose | 1.61 | 1.386 |