Top 10 genes with highest correlation to Rv1663/pks17:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1962A/vapB35 | (cc=0.5226) | info on Rv1962A/vapB35 |
| Rv1259/udgB | (cc=0.4952) | info on Rv1259/udgB |
| Rv2938/drrC | (cc=0.4896) | info on Rv2938/drrC |
| Rv2937/drrB | (cc=0.4811) | info on Rv2937/drrB |
| Rv1054/- | (cc=0.4787) | info on Rv1054/- |
| Rv1785c/cyp143 | (cc=0.4689) | info on Rv1785c/cyp143 |
| Rv3157/nuoM | (cc=0.4573) | info on Rv3157/nuoM |
| Rv2683/- | (cc=0.4534) | info on Rv2683/- |
| Rv2451/- | (cc=0.4513) | info on Rv2451/- |
| Rv2936/drrA | (cc=0.446) | info on Rv2936/drrA |
Correlation of Rv1663/pks17 with Rv1962A/vapB35
Normalized LFCs for Rv1663/pks17:
(description and provenance of datasets)
| Rv1663/pks17 | Rv1962A/vapB35 | |
| Fe_supp_jason_reseq | -0.281 | -2.087 |
| low_pH_jason_reseq | 1.472 | 0.751 |
| NO_jason_reseq | -0.659 | -1.016 |
| B6_jason_reseq | -1.086 | -1.721 |
| MHCII_jason_reseq | -1.323 | -1.617 |
| Isoniazid02 | 1.906 | 2.993 |
| Rifampicin4 | 0.154 | 0.249 |
| Ethambutol3 | 1.565 | 2.526 |
| Meropenem3 | 3.735 | 0.248 |
| Vancomycin16 | 0.432 | 0.716 |
| Rv2680_day32 | 1.025 | 1.845 |
| H37Rv_KO_MarP | -0.957 | -0.189 |
| hypoxia_3wks | 1.097 | 0.116 |
| hypoxia_6wks | 0.614 | 0.031 |
| glycerol | 1.219 | 0.0 |
| cholesterol | 0.26 | 0.461 |
| AJ | -0.698 | -0.126 |
| Bibs02 | -1.722 | 0.032 |
| Bibs02c | 0.746 | -1.338 |
| BL6 | 1.423 | 1.12 |
| BL6a | 0.706 | -0.145 |
| BXD01 | 1.377 | 1.863 |
| BXD010 | 1.085 | 0.637 |
| BXD011 | 1.098 | 1.169 |
| BXD03 | 1.413 | 1.383 |
| BXD04 | 1.217 | -0.267 |
| BXD05 | 1.341 | 0.594 |
| BXD06 | 0.537 | 1.383 |
| BXD07 | 1.396 | 0.953 |
| BXD08 | 1.047 | 2.545 |
| BXD09 | 1.171 | 1.258 |
| CAST | -0.501 | -0.706 |
| CCcont | 1.869 | 0.855 |
| DS01 | 1.15 | 1.042 |
| DS02 | 1.875 | -1.32 |
| DS04 | 0.78 | -0.461 |
| DS0c | -0.146 | 0.255 |
| GP01 | -0.033 | 1.804 |
| GP02 | -0.326 | 0.565 |
| GP0c | 1.84 | 1.454 |
| NOD | -0.989 | 1.705 |
| NZO | -0.98 | -2.362 |
| PWK | -0.769 | -0.51 |
| H37Rv_KO_CtpC | 1.469 | 0.43 |
| H37Rv_KO_CtpD | 2.322 | 2.829 |
| H37Rv_KO_Rv1272 | 0.715 | 1.058 |
| H37Rv_KO_SugABC | -0.784 | 0.46 |
| H37Rv_KO_MbtN | -0.224 | -0.34 |
| Trans05 | 0.689 | 2.557 |
| macrophage_unactivated | 0.196 | 0.051 |
| IL1 | -0.756 | -1.109 |
| Rapamycin | -0.939 | -1.746 |
| Tcell | -0.068 | 1.838 |
| GMCSF | -0.808 | -0.882 |
| IFNab | -0.333 | -0.665 |
| IFNg | 0.056 | -0.259 |
| IFNg_GMCSF1 | -1.873 | 0.333 |
| Rv1432_day32 | -0.266 | -0.488 |
| Rv1565c_day32 | 0.035 | -0.177 |
| secA2_input | -1.237 | -1.324 |
| delta_Rv3594 | -0.269 | 0.575 |
| delta_Rv3717 | -0.907 | -0.272 |
| delta_Rv3811 | -0.7 | 0.458 |
| delta_Rv0954 | 0.704 | -0.293 |
| PonA1 | 0.054 | 0.434 |
| EccD1_KO | 0.687 | 2.174 |
| EspI_KO | 1.318 | 1.437 |
| PE35_KO | 1.28 | 2.896 |
| PPE68_KO | 1.552 | 2.377 |
| glycerol2 | 0.185 | 0.113 |
| lignocerate | 0.414 | -0.946 |
| oleate | 0.187 | 1.197 |
| phosphatidylcholine | 0.354 | 0.203 |
| acetate | 0.05 | -0.893 |
| glucAc | 0.0 | -1.917 |
| Rv0950ko | 0.066 | -0.546 |
| Rv1096ko | 0.555 | 0.377 |
| Rv3684ko | 0.0 | -0.593 |
| delta_otsA_trehalose | 1.61 | 0.654 |